Hb_050898_010

Information

Type -
Description -
Location Contig50898: 5728-13010
Sequence    

Annotation

kegg
ID rcu:RCOM_0087290
description Serine/threonine-protein kinase PBS1, putative (EC:2.7.11.13)
nr
ID XP_012084843.1
description PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
swissprot
ID Q9SCZ4
description Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1
trembl
ID A0A067JTS1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19966 PE=3 SV=1
Gene Ontology
ID GO:0004697
description receptor-like protein kinase feronia

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_050898_010 0.0 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
2 Hb_005892_010 0.0763627692 - - PREDICTED: uncharacterized protein LOC105632168 [Jatropha curcas]
3 Hb_000922_290 0.0850722593 - - PREDICTED: probable boron transporter 2 [Jatropha curcas]
4 Hb_183209_020 0.093455872 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
5 Hb_000137_030 0.0940130774 - - PREDICTED: cysteine-rich repeat secretory protein 55-like [Citrus sinensis]
6 Hb_103541_010 0.0942361765 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
7 Hb_000816_050 0.0994875498 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
8 Hb_000090_020 0.1154362843 - - acyltransferase, putative [Ricinus communis]
9 Hb_189034_010 0.1164318747 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_002431_090 0.116842047 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001587_220 0.1186003209 - - receptor protein kinase, putative [Ricinus communis]
12 Hb_002477_080 0.1197992918 - - hypothetical protein RCOM_0653450 [Ricinus communis]
13 Hb_000007_210 0.1203613687 - - hypothetical protein POPTR_0010s14360g [Populus trichocarpa]
14 Hb_001823_070 0.1206213522 - - PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]
15 Hb_000316_080 0.123359438 - - ENTH/VHS family protein [Theobroma cacao]
16 Hb_002053_090 0.1249912539 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000002_230 0.1269140796 - - RING/U-box superfamily protein [Theobroma cacao]
18 Hb_015884_010 0.1286875203 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]
19 Hb_000111_190 0.129646193 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1 [Jatropha curcas]
20 Hb_000723_060 0.1318317026 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]

Gene co-expression network

sample Hb_050898_010 Hb_050898_010 Hb_005892_010 Hb_005892_010 Hb_050898_010--Hb_005892_010 Hb_000922_290 Hb_000922_290 Hb_050898_010--Hb_000922_290 Hb_183209_020 Hb_183209_020 Hb_050898_010--Hb_183209_020 Hb_000137_030 Hb_000137_030 Hb_050898_010--Hb_000137_030 Hb_103541_010 Hb_103541_010 Hb_050898_010--Hb_103541_010 Hb_000816_050 Hb_000816_050 Hb_050898_010--Hb_000816_050 Hb_005892_010--Hb_000922_290 Hb_001610_050 Hb_001610_050 Hb_005892_010--Hb_001610_050 Hb_001587_220 Hb_001587_220 Hb_005892_010--Hb_001587_220 Hb_005892_010--Hb_000137_030 Hb_000702_040 Hb_000702_040 Hb_005892_010--Hb_000702_040 Hb_000987_080 Hb_000987_080 Hb_000922_290--Hb_000987_080 Hb_000007_210 Hb_000007_210 Hb_000922_290--Hb_000007_210 Hb_000656_370 Hb_000656_370 Hb_000922_290--Hb_000656_370 Hb_145139_010 Hb_145139_010 Hb_000922_290--Hb_145139_010 Hb_183209_020--Hb_103541_010 Hb_189034_010 Hb_189034_010 Hb_183209_020--Hb_189034_010 Hb_000002_230 Hb_000002_230 Hb_183209_020--Hb_000002_230 Hb_183209_020--Hb_000137_030 Hb_000203_150 Hb_000203_150 Hb_183209_020--Hb_000203_150 Hb_000137_030--Hb_189034_010 Hb_000723_060 Hb_000723_060 Hb_000137_030--Hb_000723_060 Hb_000137_030--Hb_001587_220 Hb_000090_020 Hb_000090_020 Hb_103541_010--Hb_000090_020 Hb_012553_030 Hb_012553_030 Hb_103541_010--Hb_012553_030 Hb_000537_090 Hb_000537_090 Hb_103541_010--Hb_000537_090 Hb_002598_020 Hb_002598_020 Hb_103541_010--Hb_002598_020 Hb_064047_010 Hb_064047_010 Hb_000816_050--Hb_064047_010 Hb_002477_080 Hb_002477_080 Hb_000816_050--Hb_002477_080 Hb_002431_090 Hb_002431_090 Hb_000816_050--Hb_002431_090 Hb_000325_010 Hb_000325_010 Hb_000816_050--Hb_000325_010 Hb_002272_070 Hb_002272_070 Hb_000816_050--Hb_002272_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0279329 18.1137 2.56212 19.08 0.0908896 0.0577635
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0120885 0 0 6.60449 3.15511

CAGE analysis