Hb_050898_020

Information

Type -
Description -
Location Contig50898: 24463-25056
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP27266.1
description hypothetical protein JCGZ_19965 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JTJ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19965 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_050898_020 0.0 - - hypothetical protein JCGZ_19965 [Jatropha curcas]
2 Hb_124625_010 0.0428181765 - - hypothetical protein JCGZ_01142 [Jatropha curcas]
3 Hb_005396_010 0.0695820087 - - PREDICTED: interleukin enhancer-binding factor 3-B-like [Jatropha curcas]
4 Hb_000668_070 0.0734840419 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000772_070 0.0794691999 - - PREDICTED: uncharacterized protein LOC105649697 [Jatropha curcas]
6 Hb_000800_060 0.0893162886 - - hypothetical protein POPTR_0008s02870g [Populus trichocarpa]
7 Hb_002966_030 0.0931979464 - - conserved hypothetical protein [Ricinus communis]
8 Hb_090510_010 0.1025940147 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
9 Hb_007320_040 0.1052848908 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
10 Hb_002747_010 0.1060915668 - - PREDICTED: alcohol dehydrogenase-like 1 [Jatropha curcas]
11 Hb_001053_010 0.1270800062 - - PREDICTED: polygalacturonase-like [Jatropha curcas]
12 Hb_007897_040 0.1284361637 - - ATP binding protein, putative [Ricinus communis]
13 Hb_153457_010 0.1310629408 - - Miraculin precursor, putative [Ricinus communis]
14 Hb_177880_010 0.1333085707 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
15 Hb_069151_010 0.1338321282 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Gossypium raimondii]
16 Hb_003166_020 0.1343826826 - - PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C-like [Jatropha curcas]
17 Hb_035583_010 0.1350308439 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
18 Hb_012532_020 0.1405142243 - - Isoflavone reductase, putative [Ricinus communis]
19 Hb_004834_020 0.1457839522 - - major allergen Pru ar 1-like [Jatropha curcas]
20 Hb_003392_030 0.1481956811 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_050898_020 Hb_050898_020 Hb_124625_010 Hb_124625_010 Hb_050898_020--Hb_124625_010 Hb_005396_010 Hb_005396_010 Hb_050898_020--Hb_005396_010 Hb_000668_070 Hb_000668_070 Hb_050898_020--Hb_000668_070 Hb_000772_070 Hb_000772_070 Hb_050898_020--Hb_000772_070 Hb_000800_060 Hb_000800_060 Hb_050898_020--Hb_000800_060 Hb_002966_030 Hb_002966_030 Hb_050898_020--Hb_002966_030 Hb_124625_010--Hb_005396_010 Hb_124625_010--Hb_000800_060 Hb_090510_010 Hb_090510_010 Hb_124625_010--Hb_090510_010 Hb_124625_010--Hb_000668_070 Hb_124625_010--Hb_002966_030 Hb_005396_010--Hb_000800_060 Hb_005396_010--Hb_090510_010 Hb_005396_010--Hb_000668_070 Hb_002747_010 Hb_002747_010 Hb_005396_010--Hb_002747_010 Hb_069151_010 Hb_069151_010 Hb_000668_070--Hb_069151_010 Hb_000668_070--Hb_000800_060 Hb_000668_070--Hb_090510_010 Hb_007320_040 Hb_007320_040 Hb_000772_070--Hb_007320_040 Hb_000772_070--Hb_124625_010 Hb_000772_070--Hb_000668_070 Hb_012532_020 Hb_012532_020 Hb_000772_070--Hb_012532_020 Hb_000836_400 Hb_000836_400 Hb_000772_070--Hb_000836_400 Hb_000800_060--Hb_090510_010 Hb_000800_060--Hb_069151_010 Hb_002966_030--Hb_002747_010 Hb_153457_010 Hb_153457_010 Hb_002966_030--Hb_153457_010 Hb_002966_030--Hb_007320_040 Hb_175167_020 Hb_175167_020 Hb_002966_030--Hb_175167_020 Hb_012779_010 Hb_012779_010 Hb_002966_030--Hb_012779_010 Hb_177880_010 Hb_177880_010 Hb_002966_030--Hb_177880_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.10753 0.105438 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.862848 0

CAGE analysis