Hb_051408_010

Information

Type -
Description -
Location Contig51408: 2469-4540
Sequence    

Annotation

kegg
ID pop:POPTR_0005s25480g
description POPTRDRAFT_818768; Iron(III)-zinc(II) purple acid phosphatase precursor family protein
nr
ID AGL44395.1
description calcineurin-like phosphoesterase [Manihot esculenta]
swissprot
ID Q9SDZ9
description Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1
trembl
ID V9NCA2
description Purple acid phosphatase OS=Manihot esculenta GN=PAP10 PE=2 SV=1
Gene Ontology
ID GO:0003993
description purple acid phosphatase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46416: 2469-3426 , PASA_asmbl_46417: 3638-4167
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_051408_010 0.0 - - calcineurin-like phosphoesterase [Manihot esculenta]
2 Hb_000227_300 0.0853780516 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001032_080 0.0932319018 - - Ankyrin repeat protein [Medicago truncatula]
4 Hb_009070_010 0.0940698078 - - Spermidine synthase, putative [Ricinus communis]
5 Hb_001333_030 0.1004611177 - - Abscisic acid 8'-hydroxylase 1 [Theobroma cacao]
6 Hb_007426_190 0.107826356 - - PREDICTED: uncharacterized protein LOC103325200 [Prunus mume]
7 Hb_002626_060 0.1123022226 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
8 Hb_001022_070 0.1219449524 - - cell wall invertase [Manihot esculenta]
9 Hb_003427_020 0.126364705 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]
10 Hb_001715_060 0.1284237359 - - PREDICTED: gibberellin 3-beta-dioxygenase 1 [Jatropha curcas]
11 Hb_004314_020 0.133140551 - - Auxin-responsive GH3 family protein [Theobroma cacao]
12 Hb_000000_320 0.1366959686 - - PREDICTED: calcium uniporter protein 4, mitochondrial [Jatropha curcas]
13 Hb_001221_050 0.1367444403 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Jatropha curcas]
14 Hb_001675_350 0.137688339 - - Avr9/Cf-9 rapidly elicited protein [Jatropha curcas]
15 Hb_150573_010 0.1380153325 transcription factor TF Family: LIM Cysteine and glycine-rich protein, putative [Ricinus communis]
16 Hb_011028_040 0.1408307486 - - receptor serine/threonine kinase, putative [Ricinus communis]
17 Hb_000170_260 0.1408832966 - - amino acid transporter, putative [Ricinus communis]
18 Hb_002849_010 0.1430949499 - - PREDICTED: putative UPF0481 protein At3g02645 [Jatropha curcas]
19 Hb_004531_130 0.1443044846 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X2 [Jatropha curcas]
20 Hb_000861_060 0.1482360752 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]

Gene co-expression network

sample Hb_051408_010 Hb_051408_010 Hb_000227_300 Hb_000227_300 Hb_051408_010--Hb_000227_300 Hb_001032_080 Hb_001032_080 Hb_051408_010--Hb_001032_080 Hb_009070_010 Hb_009070_010 Hb_051408_010--Hb_009070_010 Hb_001333_030 Hb_001333_030 Hb_051408_010--Hb_001333_030 Hb_007426_190 Hb_007426_190 Hb_051408_010--Hb_007426_190 Hb_002626_060 Hb_002626_060 Hb_051408_010--Hb_002626_060 Hb_000227_300--Hb_007426_190 Hb_000861_060 Hb_000861_060 Hb_000227_300--Hb_000861_060 Hb_000227_300--Hb_009070_010 Hb_004531_130 Hb_004531_130 Hb_000227_300--Hb_004531_130 Hb_097292_010 Hb_097292_010 Hb_000227_300--Hb_097292_010 Hb_000170_260 Hb_000170_260 Hb_001032_080--Hb_000170_260 Hb_004314_020 Hb_004314_020 Hb_001032_080--Hb_004314_020 Hb_001032_080--Hb_000227_300 Hb_001032_080--Hb_007426_190 Hb_005694_170 Hb_005694_170 Hb_001032_080--Hb_005694_170 Hb_009070_010--Hb_004531_130 Hb_000000_320 Hb_000000_320 Hb_009070_010--Hb_000000_320 Hb_009070_010--Hb_002626_060 Hb_004112_070 Hb_004112_070 Hb_009070_010--Hb_004112_070 Hb_021576_160 Hb_021576_160 Hb_001333_030--Hb_021576_160 Hb_011028_040 Hb_011028_040 Hb_001333_030--Hb_011028_040 Hb_006153_020 Hb_006153_020 Hb_001333_030--Hb_006153_020 Hb_001221_050 Hb_001221_050 Hb_001333_030--Hb_001221_050 Hb_003427_020 Hb_003427_020 Hb_001333_030--Hb_003427_020 Hb_001022_070 Hb_001022_070 Hb_001333_030--Hb_001022_070 Hb_007846_030 Hb_007846_030 Hb_007426_190--Hb_007846_030 Hb_007426_190--Hb_000861_060 Hb_007426_190--Hb_097292_010 Hb_005731_040 Hb_005731_040 Hb_007426_190--Hb_005731_040 Hb_001715_060 Hb_001715_060 Hb_002626_060--Hb_001715_060 Hb_002626_060--Hb_003427_020 Hb_124677_090 Hb_124677_090 Hb_002626_060--Hb_124677_090 Hb_001638_340 Hb_001638_340 Hb_002626_060--Hb_001638_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.9203 3.34665 4.98518 0.0554275 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.535362

CAGE analysis