Hb_051437_010

Information

Type -
Description -
Location Contig51437: 25-309
Sequence    

Annotation

kegg
ID rcu:RCOM_1632290
description calmodulin-binding protein, putative (EC:3.6.4.3)
nr
ID XP_012089534.1
description PREDICTED: calmodulin-interacting protein 111 isoform X2 [Jatropha curcas]
swissprot
ID Q9LET7
description Calmodulin-interacting protein 111 OS=Arabidopsis thaliana GN=CIP111 PE=1 SV=1
trembl
ID B9RU57
description Calmodulin-binding protein, putative OS=Ricinus communis GN=RCOM_1632290 PE=3 SV=1
Gene Ontology
ID GO:0009507
description calmodulin-interacting protein 111 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_051437_010 0.0 - - PREDICTED: calmodulin-interacting protein 111 isoform X2 [Jatropha curcas]
2 Hb_051424_010 0.1219084305 - - PREDICTED: putative methyltransferase At1g22800 [Jatropha curcas]
3 Hb_002742_070 0.134641721 - - PREDICTED: villin-4-like [Jatropha curcas]
4 Hb_178041_010 0.1385336454 - - PREDICTED: signal peptide peptidase-like 2 [Populus euphratica]
5 Hb_009119_040 0.1456451226 - - PREDICTED: tobamovirus multiplication protein 2A [Jatropha curcas]
6 Hb_008029_020 0.1466854823 - - PREDICTED: uncharacterized protein LOC105631777 [Jatropha curcas]
7 Hb_009119_020 0.1486531834 - - hypothetical protein CISIN_1g033708mg [Citrus sinensis]
8 Hb_012180_040 0.1520190072 - - hypothetical protein VITISV_042517 [Vitis vinifera]
9 Hb_115477_010 0.1595350762 - - Protein dom-3, putative [Ricinus communis]
10 Hb_002815_060 0.1602950997 - - hypothetical protein B456_002G110500 [Gossypium raimondii]
11 Hb_121467_010 0.1619923214 - - tubulin-specific chaperone E, putative [Ricinus communis]
12 Hb_054586_020 0.1627109376 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
13 Hb_007333_040 0.1650950471 - - PREDICTED: proline-rich receptor-like protein kinase PERK1-like [Glycine max]
14 Hb_171788_010 0.1719086009 - - hypothetical protein CISIN_1g007892mg [Citrus sinensis]
15 Hb_181328_010 0.1731866766 - - PREDICTED: ferredoxin-dependent glutamate synthase, chloroplastic isoform X1 [Jatropha curcas]
16 Hb_000130_190 0.1745419074 - - PREDICTED: uncharacterized protein LOC105638437 [Jatropha curcas]
17 Hb_009119_030 0.177902766 - - GMFP4 [Medicago truncatula]
18 Hb_000486_060 0.1796618239 - - PREDICTED: immediate early response 3-interacting protein 1-like isoform X2 [Glycine max]
19 Hb_058702_010 0.1804418822 - - PREDICTED: importin beta-like SAD2 isoform X2 [Jatropha curcas]
20 Hb_106415_010 0.1804996083 - - PREDICTED: snRNA-activating protein complex subunit isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_051437_010 Hb_051437_010 Hb_051424_010 Hb_051424_010 Hb_051437_010--Hb_051424_010 Hb_002742_070 Hb_002742_070 Hb_051437_010--Hb_002742_070 Hb_178041_010 Hb_178041_010 Hb_051437_010--Hb_178041_010 Hb_009119_040 Hb_009119_040 Hb_051437_010--Hb_009119_040 Hb_008029_020 Hb_008029_020 Hb_051437_010--Hb_008029_020 Hb_009119_020 Hb_009119_020 Hb_051437_010--Hb_009119_020 Hb_106415_010 Hb_106415_010 Hb_051424_010--Hb_106415_010 Hb_051424_010--Hb_008029_020 Hb_006663_090 Hb_006663_090 Hb_051424_010--Hb_006663_090 Hb_181328_010 Hb_181328_010 Hb_051424_010--Hb_181328_010 Hb_115477_010 Hb_115477_010 Hb_051424_010--Hb_115477_010 Hb_002815_060 Hb_002815_060 Hb_002742_070--Hb_002815_060 Hb_002742_070--Hb_178041_010 Hb_003157_030 Hb_003157_030 Hb_002742_070--Hb_003157_030 Hb_010128_120 Hb_010128_120 Hb_002742_070--Hb_010128_120 Hb_000330_160 Hb_000330_160 Hb_002742_070--Hb_000330_160 Hb_011953_030 Hb_011953_030 Hb_002742_070--Hb_011953_030 Hb_130134_030 Hb_130134_030 Hb_178041_010--Hb_130134_030 Hb_178041_010--Hb_002815_060 Hb_088428_010 Hb_088428_010 Hb_178041_010--Hb_088428_010 Hb_171788_010 Hb_171788_010 Hb_178041_010--Hb_171788_010 Hb_005333_190 Hb_005333_190 Hb_009119_040--Hb_005333_190 Hb_002400_330 Hb_002400_330 Hb_009119_040--Hb_002400_330 Hb_028912_040 Hb_028912_040 Hb_009119_040--Hb_028912_040 Hb_009119_040--Hb_181328_010 Hb_009529_040 Hb_009529_040 Hb_009119_040--Hb_009529_040 Hb_002235_120 Hb_002235_120 Hb_008029_020--Hb_002235_120 Hb_000130_190 Hb_000130_190 Hb_008029_020--Hb_000130_190 Hb_019053_020 Hb_019053_020 Hb_008029_020--Hb_019053_020 Hb_001508_020 Hb_001508_020 Hb_008029_020--Hb_001508_020 Hb_007333_040 Hb_007333_040 Hb_009119_020--Hb_007333_040 Hb_019053_010 Hb_019053_010 Hb_009119_020--Hb_019053_010 Hb_009119_020--Hb_115477_010 Hb_009119_020--Hb_106415_010 Hb_033385_010 Hb_033385_010 Hb_009119_020--Hb_033385_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.501 30.3507 16.1798 56.4399 49.5624 158.259
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.5466 6.07202 17.2558 32.2227 21.7068

CAGE analysis