Hb_053345_010

Information

Type -
Description -
Location Contig53345: 645-746
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_053345_010 0.0 - - -
2 Hb_158296_010 0.2231642651 - - PREDICTED: choline monooxygenase, chloroplastic isoform X3 [Jatropha curcas]
3 Hb_001208_020 0.2371358383 - - -
4 Hb_001488_310 0.2536456579 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
5 Hb_073799_010 0.2572816211 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000808_120 0.2612866822 - - -
7 Hb_010367_020 0.2638890084 - - hypothetical protein POPTR_0009s054801g, partial [Populus trichocarpa]
8 Hb_004525_080 0.2662696399 - - Sugar transporter ERD6-like 6 [Morus notabilis]
9 Hb_106596_010 0.2711911182 - - conserved hypothetical protein [Ricinus communis]
10 Hb_011316_140 0.2731101692 - - PREDICTED: uncharacterized protein LOC105129591 [Populus euphratica]
11 Hb_071781_010 0.275237072 - - hypothetical protein POPTR_0010s13190g [Populus trichocarpa]
12 Hb_053073_010 0.2789227838 - - -
13 Hb_004112_060 0.2804772509 - - hypothetical protein POPTR_0017s01950g, partial [Populus trichocarpa]
14 Hb_000242_020 0.2805253 - - hypothetical protein CICLE_v100246891mg, partial [Citrus clementina]
15 Hb_001621_120 0.2859087611 - - Zeamatin precursor, putative [Ricinus communis]
16 Hb_011942_010 0.2880867865 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001916_010 0.28923524 - - hypothetical protein VITISV_021527 [Vitis vinifera]
18 Hb_154600_010 0.2900766853 - - hypothetical protein JCGZ_17786 [Jatropha curcas]
19 Hb_169505_010 0.2942951919 - - hypothetical protein JCGZ_04480 [Jatropha curcas]
20 Hb_000562_010 0.2943162524 desease resistance Gene Name: NB-ARC putative disease resistance gene NBS-LRR family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_053345_010 Hb_053345_010 Hb_158296_010 Hb_158296_010 Hb_053345_010--Hb_158296_010 Hb_001208_020 Hb_001208_020 Hb_053345_010--Hb_001208_020 Hb_001488_310 Hb_001488_310 Hb_053345_010--Hb_001488_310 Hb_073799_010 Hb_073799_010 Hb_053345_010--Hb_073799_010 Hb_000808_120 Hb_000808_120 Hb_053345_010--Hb_000808_120 Hb_010367_020 Hb_010367_020 Hb_053345_010--Hb_010367_020 Hb_000562_010 Hb_000562_010 Hb_158296_010--Hb_000562_010 Hb_133648_010 Hb_133648_010 Hb_158296_010--Hb_133648_010 Hb_007416_080 Hb_007416_080 Hb_158296_010--Hb_007416_080 Hb_158296_010--Hb_001208_020 Hb_000164_130 Hb_000164_130 Hb_158296_010--Hb_000164_130 Hb_000244_140 Hb_000244_140 Hb_158296_010--Hb_000244_140 Hb_053073_010 Hb_053073_010 Hb_001208_020--Hb_053073_010 Hb_001208_020--Hb_000562_010 Hb_005951_010 Hb_005951_010 Hb_001208_020--Hb_005951_010 Hb_000134_100 Hb_000134_100 Hb_001208_020--Hb_000134_100 Hb_003894_090 Hb_003894_090 Hb_001208_020--Hb_003894_090 Hb_001488_310--Hb_073799_010 Hb_030784_010 Hb_030784_010 Hb_001488_310--Hb_030784_010 Hb_128473_010 Hb_128473_010 Hb_001488_310--Hb_128473_010 Hb_013394_100 Hb_013394_100 Hb_001488_310--Hb_013394_100 Hb_011287_040 Hb_011287_040 Hb_001488_310--Hb_011287_040 Hb_002388_010 Hb_002388_010 Hb_073799_010--Hb_002388_010 Hb_182713_020 Hb_182713_020 Hb_073799_010--Hb_182713_020 Hb_011942_010 Hb_011942_010 Hb_073799_010--Hb_011942_010 Hb_073799_010--Hb_128473_010 Hb_073799_010--Hb_013394_100 Hb_073799_010--Hb_011287_040 Hb_071781_010 Hb_071781_010 Hb_000808_120--Hb_071781_010 Hb_005332_130 Hb_005332_130 Hb_000808_120--Hb_005332_130 Hb_002343_030 Hb_002343_030 Hb_000808_120--Hb_002343_030 Hb_004112_060 Hb_004112_060 Hb_000808_120--Hb_004112_060 Hb_000808_120--Hb_053073_010 Hb_013834_010 Hb_013834_010 Hb_000808_120--Hb_013834_010 Hb_009803_010 Hb_009803_010 Hb_010367_020--Hb_009803_010 Hb_002016_030 Hb_002016_030 Hb_010367_020--Hb_002016_030 Hb_122741_010 Hb_122741_010 Hb_010367_020--Hb_122741_010 Hb_009119_010 Hb_009119_010 Hb_010367_020--Hb_009119_010 Hb_000025_080 Hb_000025_080 Hb_010367_020--Hb_000025_080 Hb_010367_020--Hb_158296_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9911.77 10140.9 46457.2 132020 2090.73 46079.2
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 19550.2 0 0 0

CAGE analysis