Hb_053935_010

Information

Type -
Description -
Location Contig53935: 5677-6488
Sequence    

Annotation

kegg
ID egr:104455679
description cysteine-rich receptor-like protein kinase 27
nr
ID KCW64701.1
description hypothetical protein EUGRSUZ_G02294 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A059BFM9
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02294 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_053935_010 0.0 - - hypothetical protein EUGRSUZ_G02294 [Eucalyptus grandis]
2 Hb_128460_020 0.0250580754 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Nicotiana tomentosiformis]
3 Hb_000373_220 0.027162895 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
4 Hb_004241_190 0.0400540383 - - -
5 Hb_000061_060 0.0404910337 transcription factor TF Family: MYB-related transcription factor MYB28 [Arabidopsis thaliana]
6 Hb_014361_140 0.0474246318 - - PREDICTED: peroxidase 51 [Jatropha curcas]
7 Hb_158110_010 0.0673763501 - - hypothetical protein CICLE_v10012017mg [Citrus clementina]
8 Hb_000668_220 0.0717243383 - - PREDICTED: uncharacterized protein LOC105119281 [Populus euphratica]
9 Hb_000769_030 0.078627012 - - ankyrin repeat-containing protein, putative [Ricinus communis]
10 Hb_173029_010 0.0871253178 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_010369_010 0.0891463543 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000628_050 0.0916347192 - - nucleic acid binding protein, putative [Ricinus communis]
13 Hb_011429_010 0.0970615378 - - hypothetical protein POPTR_0188s00230g [Populus trichocarpa]
14 Hb_004724_290 0.1002325173 transcription factor TF Family: NAC -
15 Hb_104855_010 0.1014431347 - - -
16 Hb_006916_220 0.111848979 - - hypothetical protein JCGZ_20099 [Jatropha curcas]
17 Hb_004924_020 0.1193165471 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
18 Hb_005773_010 0.1194739224 - - -
19 Hb_008963_010 0.1263937705 desease resistance Gene Name: LRR_4 PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
20 Hb_184752_010 0.1288387167 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]

Gene co-expression network

sample Hb_053935_010 Hb_053935_010 Hb_128460_020 Hb_128460_020 Hb_053935_010--Hb_128460_020 Hb_000373_220 Hb_000373_220 Hb_053935_010--Hb_000373_220 Hb_004241_190 Hb_004241_190 Hb_053935_010--Hb_004241_190 Hb_000061_060 Hb_000061_060 Hb_053935_010--Hb_000061_060 Hb_014361_140 Hb_014361_140 Hb_053935_010--Hb_014361_140 Hb_158110_010 Hb_158110_010 Hb_053935_010--Hb_158110_010 Hb_128460_020--Hb_014361_140 Hb_128460_020--Hb_000061_060 Hb_128460_020--Hb_000373_220 Hb_128460_020--Hb_004241_190 Hb_128460_020--Hb_158110_010 Hb_000373_220--Hb_004241_190 Hb_000668_220 Hb_000668_220 Hb_000373_220--Hb_000668_220 Hb_000373_220--Hb_000061_060 Hb_000373_220--Hb_014361_140 Hb_004241_190--Hb_000061_060 Hb_000628_050 Hb_000628_050 Hb_004241_190--Hb_000628_050 Hb_173029_010 Hb_173029_010 Hb_004241_190--Hb_173029_010 Hb_000061_060--Hb_014361_140 Hb_104855_010 Hb_104855_010 Hb_000061_060--Hb_104855_010 Hb_000061_060--Hb_158110_010 Hb_014361_140--Hb_104855_010 Hb_014361_140--Hb_158110_010 Hb_014361_140--Hb_004241_190 Hb_158110_010--Hb_004241_190 Hb_158110_010--Hb_000373_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.902041 0.504633 0.833491 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis