Hb_055305_010

Information

Type -
Description -
Location Contig55305: 28-645
Sequence    

Annotation

kegg
ID rcu:RCOM_1331600
description Disease resistance protein RFL1, putative (EC:3.1.3.16)
nr
ID XP_002521789.1
description Disease resistance protein RFL1, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S720
description Disease resistance protein RFL1, putative OS=Ricinus communis GN=RCOM_1331600 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_055305_010 0.0 - - Disease resistance protein RFL1, putative [Ricinus communis]
2 Hb_002551_090 0.1281844388 - - hypothetical protein JCGZ_17224 [Jatropha curcas]
3 Hb_142332_010 0.137117755 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
4 Hb_001838_050 0.1396274803 - - hypothetical protein B456_007G218500 [Gossypium raimondii]
5 Hb_002750_010 0.1412939916 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
6 Hb_000616_050 0.1428043607 - - PREDICTED: uncharacterized protein LOC105639906 [Jatropha curcas]
7 Hb_001454_410 0.1451240876 - - PREDICTED: uncharacterized protein LOC105643453 [Jatropha curcas]
8 Hb_088916_010 0.1479583097 - - PREDICTED: receptor-like serine/threonine-protein kinase At4g25390 [Jatropha curcas]
9 Hb_001678_030 0.1485102938 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like [Jatropha curcas]
10 Hb_000367_310 0.1507333425 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
11 Hb_003119_070 0.1512797593 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
12 Hb_000852_050 0.1519401232 - - hypothetical protein POPTR_0018s02450g [Populus trichocarpa]
13 Hb_001638_110 0.1532016765 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001405_100 0.1532982937 - - PREDICTED: lysM domain receptor-like kinase 4 [Jatropha curcas]
15 Hb_000152_810 0.1534979453 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
16 Hb_001135_290 0.1544066061 - - hypothetical protein JCGZ_06658 [Jatropha curcas]
17 Hb_003031_030 0.1554340766 - - hypothetical protein JCGZ_21288 [Jatropha curcas]
18 Hb_001408_050 0.1595646666 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003453_030 0.1620180957 - - hypothetical protein JCGZ_26893 [Jatropha curcas]
20 Hb_008140_060 0.1620191666 - - Cytochrome P450, putative [Theobroma cacao]

Gene co-expression network

sample Hb_055305_010 Hb_055305_010 Hb_002551_090 Hb_002551_090 Hb_055305_010--Hb_002551_090 Hb_142332_010 Hb_142332_010 Hb_055305_010--Hb_142332_010 Hb_001838_050 Hb_001838_050 Hb_055305_010--Hb_001838_050 Hb_002750_010 Hb_002750_010 Hb_055305_010--Hb_002750_010 Hb_000616_050 Hb_000616_050 Hb_055305_010--Hb_000616_050 Hb_001454_410 Hb_001454_410 Hb_055305_010--Hb_001454_410 Hb_012807_060 Hb_012807_060 Hb_002551_090--Hb_012807_060 Hb_001158_080 Hb_001158_080 Hb_002551_090--Hb_001158_080 Hb_000934_290 Hb_000934_290 Hb_002551_090--Hb_000934_290 Hb_008140_060 Hb_008140_060 Hb_002551_090--Hb_008140_060 Hb_003052_120 Hb_003052_120 Hb_002551_090--Hb_003052_120 Hb_022501_020 Hb_022501_020 Hb_002551_090--Hb_022501_020 Hb_142332_010--Hb_001838_050 Hb_111582_010 Hb_111582_010 Hb_142332_010--Hb_111582_010 Hb_002150_010 Hb_002150_010 Hb_142332_010--Hb_002150_010 Hb_001678_030 Hb_001678_030 Hb_142332_010--Hb_001678_030 Hb_001405_100 Hb_001405_100 Hb_142332_010--Hb_001405_100 Hb_000649_030 Hb_000649_030 Hb_142332_010--Hb_000649_030 Hb_004574_010 Hb_004574_010 Hb_001838_050--Hb_004574_010 Hb_003031_030 Hb_003031_030 Hb_001838_050--Hb_003031_030 Hb_000237_150 Hb_000237_150 Hb_001838_050--Hb_000237_150 Hb_088916_010 Hb_088916_010 Hb_001838_050--Hb_088916_010 Hb_001838_050--Hb_000616_050 Hb_001693_020 Hb_001693_020 Hb_001838_050--Hb_001693_020 Hb_003987_030 Hb_003987_030 Hb_002750_010--Hb_003987_030 Hb_000236_050 Hb_000236_050 Hb_002750_010--Hb_000236_050 Hb_002750_010--Hb_002551_090 Hb_008695_130 Hb_008695_130 Hb_002750_010--Hb_008695_130 Hb_002750_010--Hb_000934_290 Hb_009581_050 Hb_009581_050 Hb_002750_010--Hb_009581_050 Hb_000616_050--Hb_000237_150 Hb_019229_020 Hb_019229_020 Hb_000616_050--Hb_019229_020 Hb_000616_050--Hb_003031_030 Hb_000616_050--Hb_000649_030 Hb_000852_050 Hb_000852_050 Hb_000616_050--Hb_000852_050 Hb_001221_480 Hb_001221_480 Hb_001454_410--Hb_001221_480 Hb_000181_160 Hb_000181_160 Hb_001454_410--Hb_000181_160 Hb_003453_030 Hb_003453_030 Hb_001454_410--Hb_003453_030 Hb_001454_410--Hb_008695_130 Hb_003807_020 Hb_003807_020 Hb_001454_410--Hb_003807_020 Hb_001408_050 Hb_001408_050 Hb_001454_410--Hb_001408_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0944934 6.3324 0.786495 3.90942 0.0391445 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.227914 0.667197 12.5343 0.73852

CAGE analysis