Hb_055320_010

Information

Type -
Description -
Location Contig55320: 891-1255
Sequence    

Annotation

kegg
ID ath:AT4G29870
description Oligosaccharyltransferase complex/magnesium transporter family protein
nr
ID XP_012075188.1
description PREDICTED: oligosaccharyltransferase complex subunit ostc [Jatropha curcas]
swissprot
ID Q5M9B7
description Oligosaccharyltransferase complex subunit ostc-B OS=Xenopus laevis GN=ostc-b PE=2 SV=1
trembl
ID A0A067KTT0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09368 PE=4 SV=1
Gene Ontology
ID GO:0005886
description oligosaccharyltransferase complex subunit ostc

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_055320_010 0.0 - - PREDICTED: oligosaccharyltransferase complex subunit ostc [Jatropha curcas]
2 Hb_003041_050 0.1105860998 - - -
3 Hb_002849_200 0.124189446 - - hypothetical protein JCGZ_15712 [Jatropha curcas]
4 Hb_000903_060 0.1275376073 - - PREDICTED: ras-related protein RABA5e [Jatropha curcas]
5 Hb_000312_080 0.1358414345 - - PREDICTED: transmembrane protein 97-like [Jatropha curcas]
6 Hb_009687_010 0.1385681702 - - PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X4 [Jatropha curcas]
7 Hb_002027_390 0.1396732084 - - shikimate dehydrogenase, putative [Ricinus communis]
8 Hb_000084_160 0.1402685057 - - SGNH hydrolase-type esterase superfamily protein, putative [Theobroma cacao]
9 Hb_000183_090 0.1425213467 - - PREDICTED: protein EARLY FLOWERING 3 isoform X2 [Jatropha curcas]
10 Hb_003266_100 0.1431916455 - - Isomerase protein [Gossypium arboreum]
11 Hb_006637_070 0.1444160693 - - PREDICTED: pentatricopeptide repeat-containing protein At2g37230 [Jatropha curcas]
12 Hb_004429_090 0.1475260212 - - PREDICTED: ras GTPase-activating protein-binding protein 1-like isoform X1 [Jatropha curcas]
13 Hb_005588_060 0.1541925508 - - PREDICTED: succinate dehydrogenase subunit 5, mitochondrial [Jatropha curcas]
14 Hb_023732_030 0.1544058125 - - PREDICTED: proteinaceous RNase P 2-like isoform X2 [Jatropha curcas]
15 Hb_000621_020 0.1569542511 - - PREDICTED: mannose-6-phosphate isomerase 1 [Jatropha curcas]
16 Hb_004734_040 0.1579041672 - - eukaryotic translation initiation factor 5A isoform I [Hevea brasiliensis]
17 Hb_000103_270 0.1581619358 - - PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 [Fragaria vesca subsp. vesca]
18 Hb_001301_110 0.1585898813 - - PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Jatropha curcas]
19 Hb_000210_120 0.158947121 - - PREDICTED: uncharacterized protein LOC105635829 isoform X1 [Jatropha curcas]
20 Hb_000431_170 0.1613789087 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 511 [Jatropha curcas]

Gene co-expression network

sample Hb_055320_010 Hb_055320_010 Hb_003041_050 Hb_003041_050 Hb_055320_010--Hb_003041_050 Hb_002849_200 Hb_002849_200 Hb_055320_010--Hb_002849_200 Hb_000903_060 Hb_000903_060 Hb_055320_010--Hb_000903_060 Hb_000312_080 Hb_000312_080 Hb_055320_010--Hb_000312_080 Hb_009687_010 Hb_009687_010 Hb_055320_010--Hb_009687_010 Hb_002027_390 Hb_002027_390 Hb_055320_010--Hb_002027_390 Hb_007894_170 Hb_007894_170 Hb_003041_050--Hb_007894_170 Hb_009787_030 Hb_009787_030 Hb_003041_050--Hb_009787_030 Hb_001427_160 Hb_001427_160 Hb_003041_050--Hb_001427_160 Hb_011344_120 Hb_011344_120 Hb_003041_050--Hb_011344_120 Hb_001301_110 Hb_001301_110 Hb_003041_050--Hb_001301_110 Hb_000414_130 Hb_000414_130 Hb_002849_200--Hb_000414_130 Hb_000665_050 Hb_000665_050 Hb_002849_200--Hb_000665_050 Hb_003622_040 Hb_003622_040 Hb_002849_200--Hb_003622_040 Hb_003266_100 Hb_003266_100 Hb_002849_200--Hb_003266_100 Hb_000820_090 Hb_000820_090 Hb_002849_200--Hb_000820_090 Hb_000258_260 Hb_000258_260 Hb_002849_200--Hb_000258_260 Hb_004734_040 Hb_004734_040 Hb_000903_060--Hb_004734_040 Hb_023732_030 Hb_023732_030 Hb_000903_060--Hb_023732_030 Hb_073973_100 Hb_073973_100 Hb_000903_060--Hb_073973_100 Hb_001018_050 Hb_001018_050 Hb_000903_060--Hb_001018_050 Hb_002197_050 Hb_002197_050 Hb_000903_060--Hb_002197_050 Hb_000556_120 Hb_000556_120 Hb_000903_060--Hb_000556_120 Hb_001215_040 Hb_001215_040 Hb_000312_080--Hb_001215_040 Hb_000431_170 Hb_000431_170 Hb_000312_080--Hb_000431_170 Hb_000312_080--Hb_002197_050 Hb_005914_170 Hb_005914_170 Hb_000312_080--Hb_005914_170 Hb_005588_060 Hb_005588_060 Hb_000312_080--Hb_005588_060 Hb_003813_050 Hb_003813_050 Hb_000312_080--Hb_003813_050 Hb_000103_270 Hb_000103_270 Hb_009687_010--Hb_000103_270 Hb_005914_010 Hb_005914_010 Hb_009687_010--Hb_005914_010 Hb_105602_010 Hb_105602_010 Hb_009687_010--Hb_105602_010 Hb_002027_140 Hb_002027_140 Hb_009687_010--Hb_002027_140 Hb_006698_030 Hb_006698_030 Hb_009687_010--Hb_006698_030 Hb_000329_760 Hb_000329_760 Hb_009687_010--Hb_000329_760 Hb_001221_570 Hb_001221_570 Hb_002027_390--Hb_001221_570 Hb_006538_090 Hb_006538_090 Hb_002027_390--Hb_006538_090 Hb_002027_390--Hb_007894_170 Hb_002027_390--Hb_003041_050 Hb_000555_100 Hb_000555_100 Hb_002027_390--Hb_000555_100 Hb_168893_020 Hb_168893_020 Hb_002027_390--Hb_168893_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.3888 33.0926 34.3099 58.3 51.9417 12.5542
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
64.7528 70.7591 33.5405 85.6643 16.8436

CAGE analysis