Hb_057018_010

Information

Type -
Description -
Location Contig57018: 1021-1311
Sequence    

Annotation

kegg
ID vvi:104878745
description putative cysteine-rich receptor-like protein kinase 35
nr
ID KDP38651.1
description hypothetical protein JCGZ_04004 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KR02
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04004 PE=4 SV=1
Gene Ontology
ID GO:0000166
description cysteine-rich rlk

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_057018_010 0.0 - - hypothetical protein JCGZ_04004 [Jatropha curcas]
2 Hb_010926_020 0.0533178456 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Camelina sativa]
3 Hb_072670_010 0.0708408542 - - Calcium-activated outward-rectifying potassium channel, putative [Ricinus communis]
4 Hb_005736_010 0.1016365888 - - PREDICTED: bidirectional sugar transporter SWEET1 isoform X2 [Jatropha curcas]
5 Hb_004652_040 0.1174874062 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_002014_120 0.1175550176 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP8 [Populus euphratica]
7 Hb_003337_010 0.1179657807 - - conserved hypothetical protein [Ricinus communis]
8 Hb_103000_010 0.1185407169 - - hypothetical protein POPTR_0007s02210g [Populus trichocarpa]
9 Hb_123887_010 0.1188908675 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
10 Hb_001948_100 0.1213353977 - - conserved hypothetical protein [Ricinus communis]
11 Hb_009838_030 0.1214642701 - - Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
12 Hb_179367_010 0.1220489075 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
13 Hb_000224_020 0.1227591105 - - PREDICTED: uncharacterized protein LOC105640888 [Jatropha curcas]
14 Hb_000174_130 0.128029754 - - flowering locus T-like protein [Fagus crenata]
15 Hb_000352_020 0.1293581875 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor LEP [Jatropha curcas]
16 Hb_104362_020 0.1295763841 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
17 Hb_008196_010 0.1325803296 - - unnamed protein product [Coffea canephora]
18 Hb_166700_010 0.134087995 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
19 Hb_000152_090 0.1352209641 - - unnamed protein product [Coffea canephora]
20 Hb_087314_010 0.1360181702 - - -

Gene co-expression network

sample Hb_057018_010 Hb_057018_010 Hb_010926_020 Hb_010926_020 Hb_057018_010--Hb_010926_020 Hb_072670_010 Hb_072670_010 Hb_057018_010--Hb_072670_010 Hb_005736_010 Hb_005736_010 Hb_057018_010--Hb_005736_010 Hb_004652_040 Hb_004652_040 Hb_057018_010--Hb_004652_040 Hb_002014_120 Hb_002014_120 Hb_057018_010--Hb_002014_120 Hb_003337_010 Hb_003337_010 Hb_057018_010--Hb_003337_010 Hb_010926_020--Hb_072670_010 Hb_010926_020--Hb_005736_010 Hb_002511_050 Hb_002511_050 Hb_010926_020--Hb_002511_050 Hb_002894_020 Hb_002894_020 Hb_010926_020--Hb_002894_020 Hb_000224_020 Hb_000224_020 Hb_010926_020--Hb_000224_020 Hb_107495_060 Hb_107495_060 Hb_072670_010--Hb_107495_060 Hb_072670_010--Hb_005736_010 Hb_087314_010 Hb_087314_010 Hb_072670_010--Hb_087314_010 Hb_148914_020 Hb_148914_020 Hb_072670_010--Hb_148914_020 Hb_005736_010--Hb_002511_050 Hb_005736_010--Hb_107495_060 Hb_033772_040 Hb_033772_040 Hb_005736_010--Hb_033772_040 Hb_004652_040--Hb_002014_120 Hb_103000_010 Hb_103000_010 Hb_004652_040--Hb_103000_010 Hb_004652_040--Hb_003337_010 Hb_179367_010 Hb_179367_010 Hb_004652_040--Hb_179367_010 Hb_009838_030 Hb_009838_030 Hb_004652_040--Hb_009838_030 Hb_000174_130 Hb_000174_130 Hb_004652_040--Hb_000174_130 Hb_002014_120--Hb_103000_010 Hb_002014_120--Hb_179367_010 Hb_002014_120--Hb_003337_010 Hb_002014_120--Hb_009838_030 Hb_001948_100 Hb_001948_100 Hb_002014_120--Hb_001948_100 Hb_003337_010--Hb_103000_010 Hb_003337_010--Hb_001948_100 Hb_003337_010--Hb_179367_010 Hb_003337_010--Hb_009838_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.993999 0.624487 3.73019 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.148503 0

CAGE analysis