Hb_057490_010

Information

Type -
Description -
Location Contig57490: 3-865
Sequence    

Annotation

kegg
ID rcu:RCOM_0852750
description mannose-1-phosphate guanyltransferase, putative (EC:2.7.7.13)
nr
ID XP_012082391.1
description PREDICTED: mannose-1-phosphate guanyltransferase alpha [Jatropha curcas]
swissprot
ID Q86HG0
description Mannose-1-phosphate guanyltransferase alpha OS=Dictyostelium discoideum GN=gmppA PE=2 SV=1
trembl
ID A0A067LAI8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09671 PE=4 SV=1
Gene Ontology
ID GO:0004475
description mannose-1-phosphate guanyltransferase alpha

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_057490_010 0.0 - - PREDICTED: mannose-1-phosphate guanyltransferase alpha [Jatropha curcas]
2 Hb_025048_040 0.1123964218 - - PREDICTED: NAP1-related protein 2 [Jatropha curcas]
3 Hb_003995_010 0.1154547995 - - -
4 Hb_000814_090 0.1178229758 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001278_060 0.1208374835 - - nucleotide binding protein, putative [Ricinus communis]
6 Hb_003716_020 0.1218207408 - - PREDICTED: putative vesicle-associated membrane protein 726 [Jatropha curcas]
7 Hb_000213_070 0.1240000784 transcription factor TF Family: ERF PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710 isoform X2 [Jatropha curcas]
8 Hb_000212_280 0.1263855533 - - PREDICTED: putative RNA-binding protein Luc7-like 2 [Gossypium raimondii]
9 Hb_000849_100 0.1306367975 - - PREDICTED: uncharacterized protein LOC105644134 [Jatropha curcas]
10 Hb_000016_280 0.1309005656 - - Arginine/serine-rich splicing factor 35 [Theobroma cacao]
11 Hb_001582_030 0.131085377 - - PREDICTED: uncharacterized protein LOC105639462 [Jatropha curcas]
12 Hb_005635_010 0.1329207321 - - PREDICTED: cleft lip and palate transmembrane protein 1 homolog [Jatropha curcas]
13 Hb_002078_420 0.1341944979 - - PREDICTED: F-box only protein 6 [Jatropha curcas]
14 Hb_007668_020 0.1347357641 - - PREDICTED: uncharacterized protein LOC105631102 [Jatropha curcas]
15 Hb_000732_020 0.1348021518 - - PREDICTED: universal stress protein A-like protein [Jatropha curcas]
16 Hb_005000_270 0.1348066711 - - unnamed protein product [Vitis vinifera]
17 Hb_000331_480 0.1355096495 transcription factor TF Family: GNAT PREDICTED: elongator complex protein 3 [Jatropha curcas]
18 Hb_013753_010 0.1355271381 - - PREDICTED: uncharacterized protein LOC105647969 isoform X1 [Jatropha curcas]
19 Hb_002725_070 0.1359860991 - - hypothetical protein PRUPE_ppa005949mg [Prunus persica]
20 Hb_006002_030 0.1362956944 - - PREDICTED: F-box/LRR-repeat protein 15 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_057490_010 Hb_057490_010 Hb_025048_040 Hb_025048_040 Hb_057490_010--Hb_025048_040 Hb_003995_010 Hb_003995_010 Hb_057490_010--Hb_003995_010 Hb_000814_090 Hb_000814_090 Hb_057490_010--Hb_000814_090 Hb_001278_060 Hb_001278_060 Hb_057490_010--Hb_001278_060 Hb_003716_020 Hb_003716_020 Hb_057490_010--Hb_003716_020 Hb_000213_070 Hb_000213_070 Hb_057490_010--Hb_000213_070 Hb_000212_280 Hb_000212_280 Hb_025048_040--Hb_000212_280 Hb_000331_480 Hb_000331_480 Hb_025048_040--Hb_000331_480 Hb_000270_450 Hb_000270_450 Hb_025048_040--Hb_000270_450 Hb_012760_200 Hb_012760_200 Hb_025048_040--Hb_012760_200 Hb_005028_010 Hb_005028_010 Hb_025048_040--Hb_005028_010 Hb_001009_050 Hb_001009_050 Hb_025048_040--Hb_001009_050 Hb_173178_020 Hb_173178_020 Hb_003995_010--Hb_173178_020 Hb_003995_010--Hb_003716_020 Hb_004218_070 Hb_004218_070 Hb_003995_010--Hb_004218_070 Hb_175612_010 Hb_175612_010 Hb_003995_010--Hb_175612_010 Hb_003995_010--Hb_000213_070 Hb_002725_070 Hb_002725_070 Hb_000814_090--Hb_002725_070 Hb_005635_010 Hb_005635_010 Hb_000814_090--Hb_005635_010 Hb_006913_040 Hb_006913_040 Hb_000814_090--Hb_006913_040 Hb_001019_170 Hb_001019_170 Hb_000814_090--Hb_001019_170 Hb_000078_100 Hb_000078_100 Hb_000814_090--Hb_000078_100 Hb_002820_040 Hb_002820_040 Hb_000814_090--Hb_002820_040 Hb_006002_030 Hb_006002_030 Hb_001278_060--Hb_006002_030 Hb_007668_020 Hb_007668_020 Hb_001278_060--Hb_007668_020 Hb_001278_060--Hb_000213_070 Hb_005129_050 Hb_005129_050 Hb_001278_060--Hb_005129_050 Hb_001433_190 Hb_001433_190 Hb_001278_060--Hb_001433_190 Hb_078477_040 Hb_078477_040 Hb_001278_060--Hb_078477_040 Hb_011497_010 Hb_011497_010 Hb_003716_020--Hb_011497_010 Hb_003716_020--Hb_007668_020 Hb_003581_020 Hb_003581_020 Hb_003716_020--Hb_003581_020 Hb_005000_270 Hb_005000_270 Hb_003716_020--Hb_005000_270 Hb_000849_100 Hb_000849_100 Hb_003716_020--Hb_000849_100 Hb_003716_020--Hb_006002_030 Hb_000213_070--Hb_006002_030 Hb_000331_190 Hb_000331_190 Hb_000213_070--Hb_000331_190 Hb_002675_060 Hb_002675_060 Hb_000213_070--Hb_002675_060 Hb_000213_070--Hb_007668_020 Hb_000213_070--Hb_078477_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
55.9949 29.3462 7.46387 13.7201 60.896 79.6046
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.4691 10.7036 8.63629 24.9714 0.527269

CAGE analysis