Hb_057655_010

Information

Type -
Description -
Location Contig57655: 1-522
Sequence    

Annotation

kegg
ID pmum:103322611
description uncharacterized protein DDB_G0271670-like
nr
ID WP_042918419.1
description MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
swissprot
ID -
description -
trembl
ID C7J7N6
description Os10g0357350 protein OS=Oryza sativa subsp. japonica GN=Os10g0357350 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_057655_010 0.0 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
2 Hb_040562_010 0.2515049753 - - -
3 Hb_001824_060 0.2954199454 - - -
4 Hb_002307_130 0.3216701284 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002260_040 0.3779977312 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
6 Hb_000215_170 0.3799949312 - - PREDICTED: uncharacterized protein LOC102596491 [Solanum tuberosum]
7 Hb_001017_120 0.3831584297 - - -
8 Hb_037271_010 0.3975376867 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
9 Hb_004958_030 0.3993181972 - - PREDICTED: uncharacterized protein LOC104904188 [Beta vulgaris subsp. vulgaris]
10 Hb_123051_010 0.4042281023 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Populus euphratica]
11 Hb_000612_070 0.4084067253 - - conserved hypothetical protein [Ricinus communis]
12 Hb_046707_010 0.409918731 - - PREDICTED: uncharacterized protein LOC104887079 [Beta vulgaris subsp. vulgaris]
13 Hb_000340_480 0.4112318321 - - -
14 Hb_003108_010 0.4130042403 - - -
15 Hb_001252_150 0.4143847375 - - -
16 Hb_003368_130 0.4165518411 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
17 Hb_001712_050 0.4181091563 - - PREDICTED: uncharacterized protein LOC105641944 [Jatropha curcas]
18 Hb_001811_060 0.4271658685 - - PREDICTED: nicotinamidase 1-like isoform X1 [Jatropha curcas]
19 Hb_005946_030 0.4280808348 - - ATP-binding cassette transporter, putative [Ricinus communis]
20 Hb_001513_020 0.4311040378 - - PREDICTED: methionine aminopeptidase 1A isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_057655_010 Hb_057655_010 Hb_040562_010 Hb_040562_010 Hb_057655_010--Hb_040562_010 Hb_001824_060 Hb_001824_060 Hb_057655_010--Hb_001824_060 Hb_002307_130 Hb_002307_130 Hb_057655_010--Hb_002307_130 Hb_002260_040 Hb_002260_040 Hb_057655_010--Hb_002260_040 Hb_000215_170 Hb_000215_170 Hb_057655_010--Hb_000215_170 Hb_001017_120 Hb_001017_120 Hb_057655_010--Hb_001017_120 Hb_003108_010 Hb_003108_010 Hb_040562_010--Hb_003108_010 Hb_011179_040 Hb_011179_040 Hb_040562_010--Hb_011179_040 Hb_001811_060 Hb_001811_060 Hb_040562_010--Hb_001811_060 Hb_040562_010--Hb_002307_130 Hb_000340_480 Hb_000340_480 Hb_040562_010--Hb_000340_480 Hb_136696_010 Hb_136696_010 Hb_001824_060--Hb_136696_010 Hb_068804_160 Hb_068804_160 Hb_001824_060--Hb_068804_160 Hb_002779_020 Hb_002779_020 Hb_001824_060--Hb_002779_020 Hb_115350_010 Hb_115350_010 Hb_001824_060--Hb_115350_010 Hb_061390_010 Hb_061390_010 Hb_001824_060--Hb_061390_010 Hb_010504_010 Hb_010504_010 Hb_002307_130--Hb_010504_010 Hb_000350_110 Hb_000350_110 Hb_002307_130--Hb_000350_110 Hb_002307_130--Hb_003108_010 Hb_007792_010 Hb_007792_010 Hb_002307_130--Hb_007792_010 Hb_002239_010 Hb_002239_010 Hb_002307_130--Hb_002239_010 Hb_001252_150 Hb_001252_150 Hb_002260_040--Hb_001252_150 Hb_000086_220 Hb_000086_220 Hb_002260_040--Hb_000086_220 Hb_001922_040 Hb_001922_040 Hb_002260_040--Hb_001922_040 Hb_000612_070 Hb_000612_070 Hb_002260_040--Hb_000612_070 Hb_002890_260 Hb_002890_260 Hb_002260_040--Hb_002890_260 Hb_005496_060 Hb_005496_060 Hb_002260_040--Hb_005496_060 Hb_003368_130 Hb_003368_130 Hb_000215_170--Hb_003368_130 Hb_003918_040 Hb_003918_040 Hb_000215_170--Hb_003918_040 Hb_005183_160 Hb_005183_160 Hb_000215_170--Hb_005183_160 Hb_004304_050 Hb_004304_050 Hb_000215_170--Hb_004304_050 Hb_008880_010 Hb_008880_010 Hb_000215_170--Hb_008880_010 Hb_000215_170--Hb_061390_010 Hb_000331_320 Hb_000331_320 Hb_001017_120--Hb_000331_320 Hb_108884_010 Hb_108884_010 Hb_001017_120--Hb_108884_010 Hb_001047_140 Hb_001047_140 Hb_001017_120--Hb_001047_140 Hb_004586_450 Hb_004586_450 Hb_001017_120--Hb_004586_450 Hb_017436_010 Hb_017436_010 Hb_001017_120--Hb_017436_010 Hb_056768_010 Hb_056768_010 Hb_001017_120--Hb_056768_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.100759 0.0936862
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.125163 0 0 0.0407256 0

CAGE analysis