Hb_058620_060

Information

Type -
Description -
Location Contig58620: 68537-70143
Sequence    

Annotation

kegg
ID pop:POPTR_0007s07420g
description POPTRDRAFT_75918; hypothetical protein
nr
ID NP_001295652.1
description uncharacterized protein LOC105646159 precursor [Jatropha curcas]
swissprot
ID A6YIH8
description Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1
trembl
ID A0A067JZU3
description CYP726A25 OS=Jatropha curcas GN=JCGZ_22599 PE=2 SV=1
Gene Ontology
ID GO:0004497
description cytochrome

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_058620_060 0.0 - - uncharacterized protein LOC105646159 precursor [Jatropha curcas]
2 Hb_000252_220 0.2222499023 - - PREDICTED: copper amine oxidase 1-like isoform X2 [Beta vulgaris subsp. vulgaris]
3 Hb_002539_100 0.2250290462 - - PREDICTED: 14-3-3-like protein GF14 iota [Jatropha curcas]
4 Hb_001124_100 0.2253516616 - - PREDICTED: vesicle-associated protein 2-2-like isoform X1 [Jatropha curcas]
5 Hb_001606_060 0.2266674494 - - conserved hypothetical protein [Ricinus communis]
6 Hb_027073_010 0.2331209907 - - PREDICTED: protein CHROMOSOME TRANSMISSION FIDELITY 7 [Jatropha curcas]
7 Hb_011671_080 0.2331662098 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
8 Hb_001008_200 0.2342597242 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC103961552 [Pyrus x bretschneideri]
9 Hb_012606_010 0.2366182677 transcription factor TF Family: IWS1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26c isoform X2 [Jatropha curcas]
10 Hb_000742_020 0.2440321924 - - ARF GTPase activator, putative [Ricinus communis]
11 Hb_007793_050 0.2451841884 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004088_040 0.247027871 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform [Jatropha curcas]
13 Hb_009748_010 0.2488286432 - - PREDICTED: endoglucanase 6 [Jatropha curcas]
14 Hb_000765_060 0.2496420099 - - Alcohol dehydrogenase-like 6 [Glycine soja]
15 Hb_000010_310 0.2509454892 - - PREDICTED: probable pectate lyase 18 [Populus euphratica]
16 Hb_002811_280 0.2526976038 - - PREDICTED: probable aldo-keto reductase 1 [Jatropha curcas]
17 Hb_000074_100 0.2535129046 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005993_010 0.2545870299 - - PREDICTED: protein transport protein SEC13 homolog B [Jatropha curcas]
19 Hb_003589_080 0.2546970559 - - PREDICTED: uncharacterized protein LOC105107863 [Populus euphratica]
20 Hb_000038_120 0.2566841039 - - PREDICTED: endoglucanase 9-like [Jatropha curcas]

Gene co-expression network

sample Hb_058620_060 Hb_058620_060 Hb_000252_220 Hb_000252_220 Hb_058620_060--Hb_000252_220 Hb_002539_100 Hb_002539_100 Hb_058620_060--Hb_002539_100 Hb_001124_100 Hb_001124_100 Hb_058620_060--Hb_001124_100 Hb_001606_060 Hb_001606_060 Hb_058620_060--Hb_001606_060 Hb_027073_010 Hb_027073_010 Hb_058620_060--Hb_027073_010 Hb_011671_080 Hb_011671_080 Hb_058620_060--Hb_011671_080 Hb_001904_050 Hb_001904_050 Hb_000252_220--Hb_001904_050 Hb_001597_050 Hb_001597_050 Hb_000252_220--Hb_001597_050 Hb_000496_110 Hb_000496_110 Hb_000252_220--Hb_000496_110 Hb_001369_630 Hb_001369_630 Hb_000252_220--Hb_001369_630 Hb_000331_350 Hb_000331_350 Hb_000252_220--Hb_000331_350 Hb_028049_010 Hb_028049_010 Hb_002539_100--Hb_028049_010 Hb_012305_130 Hb_012305_130 Hb_002539_100--Hb_012305_130 Hb_000407_070 Hb_000407_070 Hb_002539_100--Hb_000407_070 Hb_000110_120 Hb_000110_120 Hb_002539_100--Hb_000110_120 Hb_021409_080 Hb_021409_080 Hb_002539_100--Hb_021409_080 Hb_005914_110 Hb_005914_110 Hb_002539_100--Hb_005914_110 Hb_006154_020 Hb_006154_020 Hb_001124_100--Hb_006154_020 Hb_113818_010 Hb_113818_010 Hb_001124_100--Hb_113818_010 Hb_008699_030 Hb_008699_030 Hb_001124_100--Hb_008699_030 Hb_000310_100 Hb_000310_100 Hb_001124_100--Hb_000310_100 Hb_001124_100--Hb_027073_010 Hb_002804_040 Hb_002804_040 Hb_001124_100--Hb_002804_040 Hb_107495_040 Hb_107495_040 Hb_001606_060--Hb_107495_040 Hb_002174_040 Hb_002174_040 Hb_001606_060--Hb_002174_040 Hb_121881_010 Hb_121881_010 Hb_001606_060--Hb_121881_010 Hb_008566_040 Hb_008566_040 Hb_001606_060--Hb_008566_040 Hb_003935_060 Hb_003935_060 Hb_001606_060--Hb_003935_060 Hb_001102_020 Hb_001102_020 Hb_001606_060--Hb_001102_020 Hb_003207_020 Hb_003207_020 Hb_027073_010--Hb_003207_020 Hb_004007_110 Hb_004007_110 Hb_027073_010--Hb_004007_110 Hb_027073_010--Hb_021409_080 Hb_004158_020 Hb_004158_020 Hb_027073_010--Hb_004158_020 Hb_003994_030 Hb_003994_030 Hb_027073_010--Hb_003994_030 Hb_027073_010--Hb_028049_010 Hb_000359_310 Hb_000359_310 Hb_011671_080--Hb_000359_310 Hb_004088_040 Hb_004088_040 Hb_011671_080--Hb_004088_040 Hb_001609_040 Hb_001609_040 Hb_011671_080--Hb_001609_040 Hb_000370_020 Hb_000370_020 Hb_011671_080--Hb_000370_020 Hb_000742_020 Hb_000742_020 Hb_011671_080--Hb_000742_020 Hb_005183_170 Hb_005183_170 Hb_011671_080--Hb_005183_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.10382 0.0111178 0.062159 0.166447 0.0125792 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.030595 0.0481403 0.0452536 0.0384221 0.0503932

CAGE analysis