Hb_058702_010

Information

Type -
Description -
Location Contig58702: 29990-43718
Sequence    

Annotation

kegg
ID rcu:RCOM_0617240
description Importin-7, putative
nr
ID XP_012066264.1
description PREDICTED: importin beta-like SAD2 isoform X2 [Jatropha curcas]
swissprot
ID F4IRR2
description Importin beta-like SAD2 OS=Arabidopsis thaliana GN=SAD2 PE=1 SV=1
trembl
ID A0A067L6M7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23830 PE=4 SV=1
Gene Ontology
ID GO:0005622
description probable importin-7 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50006: 29995-43608
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_058702_010 0.0 - - PREDICTED: importin beta-like SAD2 isoform X2 [Jatropha curcas]
2 Hb_000160_220 0.0659059992 - - PREDICTED: protein AAR2 homolog isoform X1 [Jatropha curcas]
3 Hb_102269_010 0.092350036 - - hypothetical protein POPTR_0006s28940g [Populus trichocarpa]
4 Hb_005494_020 0.0947073449 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
5 Hb_002960_160 0.0950322768 - - PREDICTED: vacuolar protein sorting-associated protein 35B isoform X2 [Jatropha curcas]
6 Hb_002903_080 0.096765931 - - PREDICTED: splicing factor 3B subunit 2 [Jatropha curcas]
7 Hb_002301_260 0.0976233603 - - hypothetical protein MIMGU_mgv1a0031591mg, partial [Erythranthe guttata]
8 Hb_019813_010 0.1001699559 - - PREDICTED: uncharacterized protein LOC105646947 [Jatropha curcas]
9 Hb_000347_130 0.1018609277 - - PREDICTED: nuclear pore complex protein NUP107 [Jatropha curcas]
10 Hb_003124_130 0.1036143576 - - PREDICTED: KH domain-containing protein At4g18375 isoform X1 [Jatropha curcas]
11 Hb_010180_040 0.1042398395 - - PREDICTED: prosaposin isoform X1 [Jatropha curcas]
12 Hb_056196_050 0.104776905 - - PREDICTED: nuclear poly(A) polymerase 4-like [Jatropha curcas]
13 Hb_000158_100 0.1056800604 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000441_180 0.1063510793 - - Early endosome antigen, putative [Ricinus communis]
15 Hb_012023_020 0.1082528527 - - hypothetical protein JCGZ_03076 [Jatropha curcas]
16 Hb_004096_100 0.1092077006 - - PREDICTED: NADPH-dependent diflavin oxidoreductase 1 [Jatropha curcas]
17 Hb_000029_320 0.1107447633 - - PREDICTED: probable E3 ubiquitin-protein ligase ARI2 [Jatropha curcas]
18 Hb_001473_090 0.1115893389 - - PREDICTED: uncharacterized protein LOC105650374 [Jatropha curcas]
19 Hb_000600_070 0.1119943618 - - PREDICTED: leucine aminopeptidase 1-like [Jatropha curcas]
20 Hb_002815_060 0.1121578504 - - hypothetical protein B456_002G110500 [Gossypium raimondii]

Gene co-expression network

sample Hb_058702_010 Hb_058702_010 Hb_000160_220 Hb_000160_220 Hb_058702_010--Hb_000160_220 Hb_102269_010 Hb_102269_010 Hb_058702_010--Hb_102269_010 Hb_005494_020 Hb_005494_020 Hb_058702_010--Hb_005494_020 Hb_002960_160 Hb_002960_160 Hb_058702_010--Hb_002960_160 Hb_002903_080 Hb_002903_080 Hb_058702_010--Hb_002903_080 Hb_002301_260 Hb_002301_260 Hb_058702_010--Hb_002301_260 Hb_000567_050 Hb_000567_050 Hb_000160_220--Hb_000567_050 Hb_010180_040 Hb_010180_040 Hb_000160_220--Hb_010180_040 Hb_010931_040 Hb_010931_040 Hb_000160_220--Hb_010931_040 Hb_187739_020 Hb_187739_020 Hb_000160_220--Hb_187739_020 Hb_003428_070 Hb_003428_070 Hb_000160_220--Hb_003428_070 Hb_003656_180 Hb_003656_180 Hb_102269_010--Hb_003656_180 Hb_001473_090 Hb_001473_090 Hb_102269_010--Hb_001473_090 Hb_001811_120 Hb_001811_120 Hb_102269_010--Hb_001811_120 Hb_000475_020 Hb_000475_020 Hb_102269_010--Hb_000475_020 Hb_003029_130 Hb_003029_130 Hb_102269_010--Hb_003029_130 Hb_000160_290 Hb_000160_290 Hb_102269_010--Hb_000160_290 Hb_000567_010 Hb_000567_010 Hb_005494_020--Hb_000567_010 Hb_029142_010 Hb_029142_010 Hb_005494_020--Hb_029142_010 Hb_003935_030 Hb_003935_030 Hb_005494_020--Hb_003935_030 Hb_005494_020--Hb_002960_160 Hb_005494_020--Hb_003428_070 Hb_000347_130 Hb_000347_130 Hb_005494_020--Hb_000347_130 Hb_002960_160--Hb_000567_010 Hb_063716_080 Hb_063716_080 Hb_002960_160--Hb_063716_080 Hb_000796_190 Hb_000796_190 Hb_002960_160--Hb_000796_190 Hb_000743_040 Hb_000743_040 Hb_002960_160--Hb_000743_040 Hb_002044_060 Hb_002044_060 Hb_002960_160--Hb_002044_060 Hb_000436_040 Hb_000436_040 Hb_002903_080--Hb_000436_040 Hb_004096_100 Hb_004096_100 Hb_002903_080--Hb_004096_100 Hb_081879_030 Hb_081879_030 Hb_002903_080--Hb_081879_030 Hb_003464_020 Hb_003464_020 Hb_002903_080--Hb_003464_020 Hb_002903_080--Hb_010931_040 Hb_002903_080--Hb_000347_130 Hb_000671_110 Hb_000671_110 Hb_002301_260--Hb_000671_110 Hb_019813_010 Hb_019813_010 Hb_002301_260--Hb_019813_010 Hb_000951_110 Hb_000951_110 Hb_002301_260--Hb_000951_110 Hb_020665_030 Hb_020665_030 Hb_002301_260--Hb_020665_030 Hb_002301_260--Hb_003656_180 Hb_003847_120 Hb_003847_120 Hb_002301_260--Hb_003847_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.5623 29.2881 10.8523 24.9228 36.9887 68.6066
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.1663 14.5976 10.7165 20.5911 16.2001

CAGE analysis