Hb_058999_020

Information

Type -
Description -
Location Contig58999: 19629-29095
Sequence    

Annotation

kegg
ID pop:POPTR_0006s07670g
description POPTRDRAFT_867202; metaxin-related family protein
nr
ID XP_012066793.1
description PREDICTED: mitochondrial outer membrane import complex protein METAXIN [Jatropha curcas]
swissprot
ID O64471
description Mitochondrial outer membrane import complex protein METAXIN OS=Arabidopsis thaliana GN=MTX1 PE=1 SV=1
trembl
ID A0A067LDZ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04566 PE=4 SV=1
Gene Ontology
ID GO:0005741
description mitochondrial outer membrane import complex protein metaxin

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50143: 19654-26527 , PASA_asmbl_50145: 25542-25790 , PASA_asmbl_50146: 28186-28862 , PASA_asmbl_50147: 28912-29013
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_058999_020 0.0 - - PREDICTED: mitochondrial outer membrane import complex protein METAXIN [Jatropha curcas]
2 Hb_000757_060 0.0537434763 - - hypothetical protein PRUPE_ppa001141mg [Prunus persica]
3 Hb_005779_060 0.055785403 - - PREDICTED: uncharacterized protein LOC105643212 isoform X2 [Jatropha curcas]
4 Hb_000227_080 0.0562138545 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000215_110 0.0588767669 - - PREDICTED: uncharacterized protein C3F10.06c isoform X1 [Jatropha curcas]
6 Hb_000465_460 0.0597834014 - - PREDICTED: U3 small nucleolar RNA-associated protein 25 [Jatropha curcas]
7 Hb_002044_080 0.0604408654 - - PREDICTED: secretion-regulating guanine nucleotide exchange factor isoform X2 [Jatropha curcas]
8 Hb_001242_060 0.0614780091 - - PREDICTED: uncharacterized protein LOC105139508 [Populus euphratica]
9 Hb_000085_050 0.0616960103 - - PREDICTED: grpE protein homolog, mitochondrial isoform X1 [Jatropha curcas]
10 Hb_000373_070 0.063670671 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X2 [Jatropha curcas]
11 Hb_000317_240 0.0641967297 - - PREDICTED: protein DYAD [Jatropha curcas]
12 Hb_027380_050 0.0659566845 - - PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like [Jatropha curcas]
13 Hb_001633_050 0.0671528889 - - PREDICTED: histone H2A.Z-specific chaperone CHZ1 [Jatropha curcas]
14 Hb_000777_040 0.0685750109 - - PREDICTED: serine-threonine kinase receptor-associated protein-like [Jatropha curcas]
15 Hb_005539_280 0.0687494227 - - PREDICTED: uncharacterized protein LOC105644562 [Jatropha curcas]
16 Hb_001245_100 0.0689437023 transcription factor TF Family: Alfin-like ATP synthase alpha subunit mitochondrial, putative [Ricinus communis]
17 Hb_002046_180 0.0690489138 - - PREDICTED: uncharacterized protein LOC105641295 [Jatropha curcas]
18 Hb_000504_140 0.069564745 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter B family member 26, chloroplastic-like [Jatropha curcas]
19 Hb_000120_470 0.0698060923 - - hypothetical protein VITISV_017372 [Vitis vinifera]
20 Hb_000876_070 0.0702661258 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]

Gene co-expression network

sample Hb_058999_020 Hb_058999_020 Hb_000757_060 Hb_000757_060 Hb_058999_020--Hb_000757_060 Hb_005779_060 Hb_005779_060 Hb_058999_020--Hb_005779_060 Hb_000227_080 Hb_000227_080 Hb_058999_020--Hb_000227_080 Hb_000215_110 Hb_000215_110 Hb_058999_020--Hb_000215_110 Hb_000465_460 Hb_000465_460 Hb_058999_020--Hb_000465_460 Hb_002044_080 Hb_002044_080 Hb_058999_020--Hb_002044_080 Hb_001242_060 Hb_001242_060 Hb_000757_060--Hb_001242_060 Hb_000538_270 Hb_000538_270 Hb_000757_060--Hb_000538_270 Hb_002499_040 Hb_002499_040 Hb_000757_060--Hb_002499_040 Hb_000317_240 Hb_000317_240 Hb_000757_060--Hb_000317_240 Hb_001248_060 Hb_001248_060 Hb_000757_060--Hb_001248_060 Hb_000876_070 Hb_000876_070 Hb_005779_060--Hb_000876_070 Hb_000016_250 Hb_000016_250 Hb_005779_060--Hb_000016_250 Hb_002046_180 Hb_002046_180 Hb_005779_060--Hb_002046_180 Hb_002739_100 Hb_002739_100 Hb_005779_060--Hb_002739_100 Hb_000062_220 Hb_000062_220 Hb_005779_060--Hb_000062_220 Hb_002110_150 Hb_002110_150 Hb_005779_060--Hb_002110_150 Hb_000227_080--Hb_000215_110 Hb_003525_010 Hb_003525_010 Hb_000227_080--Hb_003525_010 Hb_002182_080 Hb_002182_080 Hb_000227_080--Hb_002182_080 Hb_000227_080--Hb_000317_240 Hb_003416_010 Hb_003416_010 Hb_000227_080--Hb_003416_010 Hb_002303_070 Hb_002303_070 Hb_000215_110--Hb_002303_070 Hb_000373_070 Hb_000373_070 Hb_000215_110--Hb_000373_070 Hb_003226_140 Hb_003226_140 Hb_000215_110--Hb_003226_140 Hb_001279_150 Hb_001279_150 Hb_000215_110--Hb_001279_150 Hb_000331_260 Hb_000331_260 Hb_000215_110--Hb_000331_260 Hb_000580_180 Hb_000580_180 Hb_000215_110--Hb_000580_180 Hb_000465_460--Hb_000317_240 Hb_004931_070 Hb_004931_070 Hb_000465_460--Hb_004931_070 Hb_000465_460--Hb_001242_060 Hb_001758_100 Hb_001758_100 Hb_000465_460--Hb_001758_100 Hb_001157_040 Hb_001157_040 Hb_000465_460--Hb_001157_040 Hb_000056_200 Hb_000056_200 Hb_002044_080--Hb_000056_200 Hb_006502_090 Hb_006502_090 Hb_002044_080--Hb_006502_090 Hb_002044_080--Hb_001242_060 Hb_000120_790 Hb_000120_790 Hb_002044_080--Hb_000120_790 Hb_000085_050 Hb_000085_050 Hb_002044_080--Hb_000085_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.0883 9.58511 9.97513 9.20965 11.6581 15.8415
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.5144 23.4565 16.8067 12.7708 9.72517

CAGE analysis