Hb_059162_010

Information

Type -
Description -
Location Contig59162: 1286-2155
Sequence    

Annotation

kegg
ID rcu:RCOM_0906340
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.25 2.7.11.14)
nr
ID XP_002518563.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q9T0J1
description Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1
trembl
ID B9RXU4
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0906340 PE=4 SV=1
Gene Ontology
ID GO:0005622
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_059162_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_047163_010 0.0442182393 - - PREDICTED: periaxin-like [Populus euphratica]
3 Hb_011628_030 0.0646647964 - - conserved hypothetical protein [Ricinus communis]
4 Hb_041769_010 0.0695300454 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
5 Hb_004185_040 0.0778731908 - - polygalacturonase, putative [Ricinus communis]
6 Hb_002743_030 0.0835141789 transcription factor TF Family: MYB PREDICTED: transcription factor RAX2 [Populus euphratica]
7 Hb_004195_040 0.0847255308 - - salicylic acid methyl transferase [Capsicum annuum]
8 Hb_006446_060 0.0911904497 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
9 Hb_001173_050 0.0941721113 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
10 Hb_003074_070 0.0945004619 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
11 Hb_005731_080 0.0960900697 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
12 Hb_000101_050 0.0977791304 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
13 Hb_012019_030 0.0996144618 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
14 Hb_161393_010 0.100084835 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_005653_020 0.1002924248 transcription factor TF Family: C2H2 TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
16 Hb_000813_120 0.1005849231 - - PREDICTED: serine carboxypeptidase-like 18 [Tarenaya hassleriana]
17 Hb_004931_060 0.1011967992 transcription factor TF Family: MYB-related PREDICTED: myb-related protein Myb4 [Nelumbo nucifera]
18 Hb_125876_010 0.1025859092 - - unnamed protein product [Vitis vinifera]
19 Hb_001621_140 0.1039377028 - - PREDICTED: glycerol-3-phosphate acyltransferase 5 [Jatropha curcas]
20 Hb_004109_300 0.1051242401 - - hypothetical protein POPTR_0003s21800g [Populus trichocarpa]

Gene co-expression network

sample Hb_059162_010 Hb_059162_010 Hb_047163_010 Hb_047163_010 Hb_059162_010--Hb_047163_010 Hb_011628_030 Hb_011628_030 Hb_059162_010--Hb_011628_030 Hb_041769_010 Hb_041769_010 Hb_059162_010--Hb_041769_010 Hb_004185_040 Hb_004185_040 Hb_059162_010--Hb_004185_040 Hb_002743_030 Hb_002743_030 Hb_059162_010--Hb_002743_030 Hb_004195_040 Hb_004195_040 Hb_059162_010--Hb_004195_040 Hb_047163_010--Hb_011628_030 Hb_125876_010 Hb_125876_010 Hb_047163_010--Hb_125876_010 Hb_047163_010--Hb_002743_030 Hb_004109_300 Hb_004109_300 Hb_047163_010--Hb_004109_300 Hb_004931_060 Hb_004931_060 Hb_047163_010--Hb_004931_060 Hb_011628_030--Hb_125876_010 Hb_011628_030--Hb_004931_060 Hb_005550_070 Hb_005550_070 Hb_011628_030--Hb_005550_070 Hb_011628_030--Hb_002743_030 Hb_006446_060 Hb_006446_060 Hb_041769_010--Hb_006446_060 Hb_000101_050 Hb_000101_050 Hb_041769_010--Hb_000101_050 Hb_161393_010 Hb_161393_010 Hb_041769_010--Hb_161393_010 Hb_001621_140 Hb_001621_140 Hb_041769_010--Hb_001621_140 Hb_041769_010--Hb_004185_040 Hb_004185_040--Hb_004195_040 Hb_012019_030 Hb_012019_030 Hb_004185_040--Hb_012019_030 Hb_001173_050 Hb_001173_050 Hb_004185_040--Hb_001173_050 Hb_011856_010 Hb_011856_010 Hb_004185_040--Hb_011856_010 Hb_139460_010 Hb_139460_010 Hb_004185_040--Hb_139460_010 Hb_000813_120 Hb_000813_120 Hb_004185_040--Hb_000813_120 Hb_002743_030--Hb_125876_010 Hb_003074_070 Hb_003074_070 Hb_002743_030--Hb_003074_070 Hb_002603_020 Hb_002603_020 Hb_002743_030--Hb_002603_020 Hb_005731_080 Hb_005731_080 Hb_002743_030--Hb_005731_080 Hb_002743_030--Hb_004109_300 Hb_004195_040--Hb_012019_030 Hb_001141_170 Hb_001141_170 Hb_004195_040--Hb_001141_170 Hb_004195_040--Hb_139460_010 Hb_004195_040--Hb_000813_120 Hb_004195_040--Hb_005731_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 9.93702 0.634134 1.37328 0.0246899 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 26.7373 0

CAGE analysis