Hb_059226_010

Information

Type -
Description -
Location Contig59226: 199-753
Sequence    

Annotation

kegg
ID pmum:103338766
description kinesin-like protein NACK1
nr
ID XP_012075451.1
description PREDICTED: kinesin-like protein NACK1 [Jatropha curcas]
swissprot
ID Q8S950
description Kinesin-like protein NACK1 OS=Nicotiana tabacum GN=NACK1 PE=1 SV=1
trembl
ID A0A067KG34
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_10720 PE=3 SV=1
Gene Ontology
ID GO:0005634
description kinesin-like protein nack1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_059226_010 0.0 - - PREDICTED: kinesin-like protein NACK1 [Jatropha curcas]
2 Hb_006198_100 0.0862730519 - - PREDICTED: RNA-binding protein 24-B isoform X1 [Jatropha curcas]
3 Hb_000418_040 0.1002677341 - - hypothetical protein RCOM_0377590 [Ricinus communis]
4 Hb_006693_010 0.1139837902 - - PREDICTED: uncharacterized protein LOC105628875 [Jatropha curcas]
5 Hb_000538_290 0.1208558934 - - hypothetical protein RCOM_0303940 [Ricinus communis]
6 Hb_000107_360 0.1248478573 - - PREDICTED: xylem cysteine proteinase 1 [Jatropha curcas]
7 Hb_009113_020 0.1282454096 - - PREDICTED: probable polygalacturonase non-catalytic subunit JP650 [Jatropha curcas]
8 Hb_000701_020 0.1351303471 - - PREDICTED: protein ENDOSPERM DEFECTIVE 1-like isoform X1 [Jatropha curcas]
9 Hb_000390_010 0.1376197848 - - PREDICTED: protein CDI [Jatropha curcas]
10 Hb_118282_020 0.1376303942 - - PREDICTED: uncharacterized protein LOC105631532 isoform X3 [Jatropha curcas]
11 Hb_002686_320 0.1377203471 - - syntaxin, putative [Ricinus communis]
12 Hb_001971_040 0.1391909642 - - PREDICTED: beta-glucosidase 44-like [Jatropha curcas]
13 Hb_002836_110 0.1423357851 transcription factor TF Family: TUB PREDICTED: tubby-like protein 8 [Jatropha curcas]
14 Hb_000567_290 0.1441971234 - - hypothetical protein RCOM_0303940 [Ricinus communis]
15 Hb_002203_010 0.145302491 - - PREDICTED: kinesin-like protein KIF18B isoform X1 [Vitis vinifera]
16 Hb_001989_030 0.1454456347 - - PREDICTED: copper transport protein ATX1 [Jatropha curcas]
17 Hb_009545_060 0.1459744798 - - PREDICTED: uncharacterized protein LOC105632005 [Jatropha curcas]
18 Hb_001348_100 0.1470217034 - - PREDICTED: uncharacterized protein LOC105638934 [Jatropha curcas]
19 Hb_001856_210 0.1476092546 - - PREDICTED: uncharacterized protein LOC105644171 [Jatropha curcas]
20 Hb_001699_270 0.1488571872 - - PREDICTED: uncharacterized protein LOC105628996 [Jatropha curcas]

Gene co-expression network

sample Hb_059226_010 Hb_059226_010 Hb_006198_100 Hb_006198_100 Hb_059226_010--Hb_006198_100 Hb_000418_040 Hb_000418_040 Hb_059226_010--Hb_000418_040 Hb_006693_010 Hb_006693_010 Hb_059226_010--Hb_006693_010 Hb_000538_290 Hb_000538_290 Hb_059226_010--Hb_000538_290 Hb_000107_360 Hb_000107_360 Hb_059226_010--Hb_000107_360 Hb_009113_020 Hb_009113_020 Hb_059226_010--Hb_009113_020 Hb_002203_010 Hb_002203_010 Hb_006198_100--Hb_002203_010 Hb_002836_110 Hb_002836_110 Hb_006198_100--Hb_002836_110 Hb_006198_100--Hb_000538_290 Hb_006198_100--Hb_009113_020 Hb_001623_250 Hb_001623_250 Hb_006198_100--Hb_001623_250 Hb_118282_020 Hb_118282_020 Hb_000418_040--Hb_118282_020 Hb_000661_150 Hb_000661_150 Hb_000418_040--Hb_000661_150 Hb_004619_090 Hb_004619_090 Hb_000418_040--Hb_004619_090 Hb_001565_090 Hb_001565_090 Hb_000418_040--Hb_001565_090 Hb_007474_020 Hb_007474_020 Hb_000418_040--Hb_007474_020 Hb_000522_160 Hb_000522_160 Hb_006693_010--Hb_000522_160 Hb_001971_040 Hb_001971_040 Hb_006693_010--Hb_001971_040 Hb_000020_050 Hb_000020_050 Hb_006693_010--Hb_000020_050 Hb_001348_100 Hb_001348_100 Hb_006693_010--Hb_001348_100 Hb_006810_040 Hb_006810_040 Hb_006693_010--Hb_006810_040 Hb_005332_030 Hb_005332_030 Hb_006693_010--Hb_005332_030 Hb_002686_320 Hb_002686_320 Hb_000538_290--Hb_002686_320 Hb_000538_290--Hb_009113_020 Hb_000538_290--Hb_006810_040 Hb_000701_020 Hb_000701_020 Hb_000538_290--Hb_000701_020 Hb_000977_190 Hb_000977_190 Hb_000538_290--Hb_000977_190 Hb_000187_050 Hb_000187_050 Hb_000538_290--Hb_000187_050 Hb_000072_230 Hb_000072_230 Hb_000107_360--Hb_000072_230 Hb_000964_050 Hb_000964_050 Hb_000107_360--Hb_000964_050 Hb_000107_360--Hb_006198_100 Hb_002818_060 Hb_002818_060 Hb_000107_360--Hb_002818_060 Hb_000417_090 Hb_000417_090 Hb_000107_360--Hb_000417_090 Hb_005496_040 Hb_005496_040 Hb_000107_360--Hb_005496_040 Hb_009113_020--Hb_002686_320 Hb_009113_020--Hb_002836_110 Hb_009545_060 Hb_009545_060 Hb_009113_020--Hb_009545_060 Hb_001856_210 Hb_001856_210 Hb_009113_020--Hb_001856_210 Hb_005398_050 Hb_005398_050 Hb_009113_020--Hb_005398_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.137033 9.00672 9.45101 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.168407 0.264554 0.217286 0.725816 1.19576

CAGE analysis