Hb_059275_010

Information

Type -
Description -
Location Contig59275: 3568-4409
Sequence    

Annotation

kegg
ID tcc:TCM_022423
description Nucleotide-diphospho-sugar transferases superfamily protein isoform 1
nr
ID XP_012066505.1
description PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
swissprot
ID Q9LZR3
description Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis thaliana GN=CSLA9 PE=2 SV=1
trembl
ID A0A067LFA8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23699 PE=4 SV=1
Gene Ontology
ID GO:0051753
description glucomannan 4-beta-mannosyltransferase 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_059275_010 0.0 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
2 Hb_020738_010 0.0706436515 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
3 Hb_011574_020 0.0750745411 - - hypothetical protein JCGZ_21524 [Jatropha curcas]
4 Hb_001715_060 0.0808918513 - - PREDICTED: gibberellin 3-beta-dioxygenase 1 [Jatropha curcas]
5 Hb_029977_030 0.0817643347 transcription factor TF Family: bZIP conserved hypothetical protein [Ricinus communis]
6 Hb_000586_110 0.0902669572 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
7 Hb_001638_340 0.0905388942 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000077_280 0.0970296997 - - ankyrin repeat-containing protein, putative [Ricinus communis]
9 Hb_008895_020 0.0981142921 - - Phospho-N-acetylmuramoyl-pentapeptide-transferase, putative [Theobroma cacao]
10 Hb_096027_010 0.0995927787 - - ankyrin repeat-containing protein, putative [Ricinus communis]
11 Hb_000012_350 0.1019071465 transcription factor TF Family: HB PREDICTED: homeobox protein ATH1 [Jatropha curcas]
12 Hb_011853_020 0.1021745967 - - Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis]
13 Hb_000441_130 0.1082998167 - - PREDICTED: homeobox-leucine zipper protein HOX32 [Vitis vinifera]
14 Hb_084812_010 0.1083534164 - - PREDICTED: putative RING-H2 finger protein ATL21B [Vitis vinifera]
15 Hb_001794_040 0.1084521321 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH63 isoform X1 [Jatropha curcas]
16 Hb_017383_010 0.1086337011 - - PREDICTED: uncharacterized protein LOC105628176 [Jatropha curcas]
17 Hb_002636_120 0.1101859612 - - Protein bem46, putative [Ricinus communis]
18 Hb_000003_370 0.1114736838 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 3 [Jatropha curcas]
19 Hb_050898_030 0.1136066828 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000861_060 0.1176291418 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]

Gene co-expression network

sample Hb_059275_010 Hb_059275_010 Hb_020738_010 Hb_020738_010 Hb_059275_010--Hb_020738_010 Hb_011574_020 Hb_011574_020 Hb_059275_010--Hb_011574_020 Hb_001715_060 Hb_001715_060 Hb_059275_010--Hb_001715_060 Hb_029977_030 Hb_029977_030 Hb_059275_010--Hb_029977_030 Hb_000586_110 Hb_000586_110 Hb_059275_010--Hb_000586_110 Hb_001638_340 Hb_001638_340 Hb_059275_010--Hb_001638_340 Hb_020738_010--Hb_011574_020 Hb_001794_040 Hb_001794_040 Hb_020738_010--Hb_001794_040 Hb_050898_030 Hb_050898_030 Hb_020738_010--Hb_050898_030 Hb_000012_350 Hb_000012_350 Hb_020738_010--Hb_000012_350 Hb_000077_280 Hb_000077_280 Hb_020738_010--Hb_000077_280 Hb_011574_020--Hb_001638_340 Hb_011574_020--Hb_000012_350 Hb_008895_020 Hb_008895_020 Hb_011574_020--Hb_008895_020 Hb_011574_020--Hb_001794_040 Hb_001715_060--Hb_001638_340 Hb_007357_010 Hb_007357_010 Hb_001715_060--Hb_007357_010 Hb_001715_060--Hb_029977_030 Hb_001715_060--Hb_008895_020 Hb_124677_090 Hb_124677_090 Hb_001715_060--Hb_124677_090 Hb_006651_030 Hb_006651_030 Hb_029977_030--Hb_006651_030 Hb_096027_010 Hb_096027_010 Hb_029977_030--Hb_096027_010 Hb_029977_030--Hb_008895_020 Hb_011853_020 Hb_011853_020 Hb_029977_030--Hb_011853_020 Hb_026218_010 Hb_026218_010 Hb_000586_110--Hb_026218_010 Hb_005731_040 Hb_005731_040 Hb_000586_110--Hb_005731_040 Hb_097292_010 Hb_097292_010 Hb_000586_110--Hb_097292_010 Hb_000861_060 Hb_000861_060 Hb_000586_110--Hb_000861_060 Hb_001025_130 Hb_001025_130 Hb_000586_110--Hb_001025_130 Hb_002636_120 Hb_002636_120 Hb_000586_110--Hb_002636_120 Hb_001638_340--Hb_008895_020 Hb_001638_340--Hb_124677_090 Hb_001477_060 Hb_001477_060 Hb_001638_340--Hb_001477_060 Hb_001638_340--Hb_000012_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.285089 22.5295 71.7925 110.722 0.384452 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.341266 34.2262

CAGE analysis