Hb_059436_010

Information

Type -
Description -
Location Contig59436: 3341-3838
Sequence    

Annotation

kegg
ID rcu:RCOM_0824250
description UDP-glucuronosyltransferase, putative (EC:2.4.1.210)
nr
ID XP_002525853.1
description UDP-glucuronosyltransferase, putative [Ricinus communis]
swissprot
ID F8WLS6
description 7-deoxyloganetin glucosyltransferase OS=Catharanthus roseus GN=UGT85A23 PE=1 SV=1
trembl
ID B9SIN4
description UDP-glucuronosyltransferase, putative OS=Ricinus communis GN=RCOM_0824250 PE=3 SV=1
Gene Ontology
ID GO:0016758
description 7-deoxyloganetin glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_059436_010 0.0 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
2 Hb_000028_630 0.2236556163 - - PIN-like protein, partial [Selaginella apoda]
3 Hb_000922_440 0.2284807596 - - -
4 Hb_184629_010 0.231867175 - - UDP-Glycosyltransferase superfamily protein isoform 1 [Theobroma cacao]
5 Hb_001178_120 0.2698926118 - - non-ltr retroelement reverse transcriptase [Rosa rugosa]
6 Hb_040779_010 0.2714098534 - - -
7 Hb_028848_030 0.2751016588 - - -
8 Hb_005892_070 0.2755355855 - - Ribosomal L11 methyltransferase [Gossypium arboreum]
9 Hb_005539_320 0.2884124355 - - PREDICTED: pumilio homolog 15-like [Vitis vinifera]
10 Hb_158990_010 0.2924664591 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
11 Hb_087221_010 0.2926989658 - - hypothetical protein CISIN_1g033698mg [Citrus sinensis]
12 Hb_000270_860 0.294427072 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000094_390 0.296979183 - - PREDICTED: acyl-[acyl-carrier-protein] desaturase, chloroplastic-like [Nelumbo nucifera]
14 Hb_178389_010 0.2979678774 - - PREDICTED: U-box domain-containing protein 15-like isoform X2 [Jatropha curcas]
15 Hb_000153_020 0.3017994146 - - conserved hypothetical protein [Ricinus communis]
16 Hb_020549_010 0.3093326941 - - PREDICTED: uncharacterized protein LOC105638664 isoform X2 [Jatropha curcas]
17 Hb_013124_010 0.3109580668 - - PREDICTED: (+)-neomenthol dehydrogenase-like isoform X1 [Jatropha curcas]
18 Hb_001604_110 0.3125623763 - - -
19 Hb_177627_010 0.3172454758 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
20 Hb_000200_060 0.3183087078 - - palmitoyl-acyl carrier thioesterase [Medicago truncatula]

Gene co-expression network

sample Hb_059436_010 Hb_059436_010 Hb_000028_630 Hb_000028_630 Hb_059436_010--Hb_000028_630 Hb_000922_440 Hb_000922_440 Hb_059436_010--Hb_000922_440 Hb_184629_010 Hb_184629_010 Hb_059436_010--Hb_184629_010 Hb_001178_120 Hb_001178_120 Hb_059436_010--Hb_001178_120 Hb_040779_010 Hb_040779_010 Hb_059436_010--Hb_040779_010 Hb_028848_030 Hb_028848_030 Hb_059436_010--Hb_028848_030 Hb_000094_390 Hb_000094_390 Hb_000028_630--Hb_000094_390 Hb_001691_050 Hb_001691_050 Hb_000028_630--Hb_001691_050 Hb_002234_220 Hb_002234_220 Hb_000028_630--Hb_002234_220 Hb_000733_040 Hb_000733_040 Hb_000028_630--Hb_000733_040 Hb_007634_020 Hb_007634_020 Hb_000028_630--Hb_007634_020 Hb_073212_010 Hb_073212_010 Hb_000028_630--Hb_073212_010 Hb_000922_440--Hb_184629_010 Hb_000219_070 Hb_000219_070 Hb_000922_440--Hb_000219_070 Hb_000922_440--Hb_040779_010 Hb_000002_320 Hb_000002_320 Hb_000922_440--Hb_000002_320 Hb_034667_020 Hb_034667_020 Hb_000922_440--Hb_034667_020 Hb_184629_010--Hb_040779_010 Hb_000200_060 Hb_000200_060 Hb_184629_010--Hb_000200_060 Hb_184629_010--Hb_000219_070 Hb_006960_030 Hb_006960_030 Hb_184629_010--Hb_006960_030 Hb_158990_010 Hb_158990_010 Hb_001178_120--Hb_158990_010 Hb_000153_020 Hb_000153_020 Hb_001178_120--Hb_000153_020 Hb_001178_120--Hb_000094_390 Hb_005539_320 Hb_005539_320 Hb_001178_120--Hb_005539_320 Hb_177627_010 Hb_177627_010 Hb_001178_120--Hb_177627_010 Hb_132629_010 Hb_132629_010 Hb_001178_120--Hb_132629_010 Hb_000214_090 Hb_000214_090 Hb_040779_010--Hb_000214_090 Hb_040779_010--Hb_000200_060 Hb_040779_010--Hb_028848_030 Hb_012107_070 Hb_012107_070 Hb_040779_010--Hb_012107_070 Hb_028848_030--Hb_012107_070 Hb_006230_040 Hb_006230_040 Hb_028848_030--Hb_006230_040 Hb_028848_030--Hb_000214_090 Hb_005517_010 Hb_005517_010 Hb_028848_030--Hb_005517_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.403862 0 0.0948727 0 0.116369 0.103616
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis