Hb_060534_010

Information

Type -
Description -
Location Contig60534: 1393-2008
Sequence    

Annotation

kegg
ID rcu:RCOM_0059350
description diphosphoinositol polyphosphate phosphohydrolase, putative
nr
ID XP_002531008.1
description diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
swissprot
ID Q9LQU5
description Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana GN=NUDT18 PE=2 SV=1
trembl
ID B9SYD9
description Diphosphoinositol polyphosphate phosphohydrolase, putative OS=Ricinus communis GN=RCOM_0059350 PE=3 SV=1
Gene Ontology
ID GO:0016787
description nudix hydrolase mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_060534_010 0.0 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
2 Hb_000483_470 0.0899519319 - - PREDICTED: zeaxanthin epoxidase, chloroplastic-like isoform X1 [Jatropha curcas]
3 Hb_012833_010 0.0967411716 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
4 Hb_000343_050 0.1042021394 - - conserved hypothetical protein [Ricinus communis]
5 Hb_003767_060 0.1074055044 - - PREDICTED: serine/threonine-protein kinase CDL1 [Jatropha curcas]
6 Hb_003373_050 0.1079920393 - - receptor protein kinase zmpk1, putative [Ricinus communis]
7 Hb_004017_030 0.1080814247 - - PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Jatropha curcas]
8 Hb_000313_250 0.1110356285 - - PREDICTED: probable ribose-5-phosphate isomerase 2 [Jatropha curcas]
9 Hb_000025_700 0.1130089608 - - PREDICTED: serine--glyoxylate aminotransferase [Nelumbo nucifera]
10 Hb_000294_020 0.1132211855 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Jatropha curcas]
11 Hb_007462_020 0.1134198587 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
12 Hb_000732_300 0.1144866668 - - PREDICTED: uncharacterized protein LOC105649465 isoform X2 [Jatropha curcas]
13 Hb_001369_340 0.1147996583 - - Peroxisomal membrane protein 11B [Theobroma cacao]
14 Hb_000413_190 0.1151433919 - - PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Pyrus x bretschneideri]
15 Hb_002027_100 0.1201093959 - - conserved hypothetical protein [Ricinus communis]
16 Hb_101133_040 0.1205122814 - - PREDICTED: nudix hydrolase 18, mitochondrial-like [Jatropha curcas]
17 Hb_002010_030 0.1212103663 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
18 Hb_110266_010 0.121742676 - - PREDICTED: pentatricopeptide repeat-containing protein At5g21222-like [Jatropha curcas]
19 Hb_004117_380 0.1218654713 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 14 [Jatropha curcas]
20 Hb_000890_170 0.1251870439 - - PREDICTED: acyl-CoA-binding domain-containing protein 5 [Jatropha curcas]

Gene co-expression network

sample Hb_060534_010 Hb_060534_010 Hb_000483_470 Hb_000483_470 Hb_060534_010--Hb_000483_470 Hb_012833_010 Hb_012833_010 Hb_060534_010--Hb_012833_010 Hb_000343_050 Hb_000343_050 Hb_060534_010--Hb_000343_050 Hb_003767_060 Hb_003767_060 Hb_060534_010--Hb_003767_060 Hb_003373_050 Hb_003373_050 Hb_060534_010--Hb_003373_050 Hb_004017_030 Hb_004017_030 Hb_060534_010--Hb_004017_030 Hb_000294_020 Hb_000294_020 Hb_000483_470--Hb_000294_020 Hb_003777_090 Hb_003777_090 Hb_000483_470--Hb_003777_090 Hb_004109_140 Hb_004109_140 Hb_000483_470--Hb_004109_140 Hb_000928_100 Hb_000928_100 Hb_000483_470--Hb_000928_100 Hb_000025_700 Hb_000025_700 Hb_000483_470--Hb_000025_700 Hb_004117_370 Hb_004117_370 Hb_012833_010--Hb_004117_370 Hb_014720_140 Hb_014720_140 Hb_012833_010--Hb_014720_140 Hb_015934_060 Hb_015934_060 Hb_012833_010--Hb_015934_060 Hb_000982_100 Hb_000982_100 Hb_012833_010--Hb_000982_100 Hb_000313_250 Hb_000313_250 Hb_012833_010--Hb_000313_250 Hb_001677_170 Hb_001677_170 Hb_000343_050--Hb_001677_170 Hb_006188_020 Hb_006188_020 Hb_000343_050--Hb_006188_020 Hb_005890_010 Hb_005890_010 Hb_000343_050--Hb_005890_010 Hb_001926_070 Hb_001926_070 Hb_000343_050--Hb_001926_070 Hb_032731_010 Hb_032731_010 Hb_000343_050--Hb_032731_010 Hb_111997_010 Hb_111997_010 Hb_000343_050--Hb_111997_010 Hb_001369_340 Hb_001369_340 Hb_003767_060--Hb_001369_340 Hb_002010_030 Hb_002010_030 Hb_003767_060--Hb_002010_030 Hb_003767_060--Hb_004017_030 Hb_003209_150 Hb_003209_150 Hb_003767_060--Hb_003209_150 Hb_007462_020 Hb_007462_020 Hb_003767_060--Hb_007462_020 Hb_002818_160 Hb_002818_160 Hb_003767_060--Hb_002818_160 Hb_005433_020 Hb_005433_020 Hb_003373_050--Hb_005433_020 Hb_004306_090 Hb_004306_090 Hb_003373_050--Hb_004306_090 Hb_003373_050--Hb_002010_030 Hb_003373_050--Hb_003767_060 Hb_000460_040 Hb_000460_040 Hb_003373_050--Hb_000460_040 Hb_006106_010 Hb_006106_010 Hb_003373_050--Hb_006106_010 Hb_004017_030--Hb_007462_020 Hb_000155_020 Hb_000155_020 Hb_004017_030--Hb_000155_020 Hb_004017_030--Hb_001369_340 Hb_010136_010 Hb_010136_010 Hb_004017_030--Hb_010136_010 Hb_002284_160 Hb_002284_160 Hb_004017_030--Hb_002284_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.930169 79.981 293.487 89.7783 2.23288 1.23353
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.09463 3.37596 5.3075 2.6833 245.526

CAGE analysis