Hb_061195_010

Information

Type -
Description -
Location Contig61195: 15277-16785
Sequence    

Annotation

kegg
ID rcu:RCOM_1596620
description Galactose oxidase precursor, putative (EC:1.1.3.9)
nr
ID XP_002510488.1
description Galactose oxidase precursor, putative [Ricinus communis]
swissprot
ID I1S2N3
description Galactose oxidase OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=GAOA PE=3 SV=1
trembl
ID B9R845
description Galactose oxidase, putative OS=Ricinus communis GN=RCOM_1596620 PE=4 SV=1
Gene Ontology
ID GO:0045480
description galactose oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_061195_010 0.0 - - Galactose oxidase precursor, putative [Ricinus communis]
2 Hb_173448_010 0.0943914148 - - PREDICTED: galactose oxidase-like [Jatropha curcas]
3 Hb_012239_080 0.0992548415 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 4-like [Jatropha curcas]
4 Hb_029510_110 0.1020036956 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]
5 Hb_004055_180 0.114606013 - - cell wall invertase [Manihot esculenta]
6 Hb_004195_240 0.1201631292 - - Peroxidase 72 precursor, putative [Ricinus communis]
7 Hb_148435_010 0.1242390423 - - glutathione s-transferase, putative [Ricinus communis]
8 Hb_000563_610 0.1250658072 - - PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Jatropha curcas]
9 Hb_004222_010 0.1289430007 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
10 Hb_000466_090 0.1327063705 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X1 [Jatropha curcas]
11 Hb_033363_080 0.1368826715 - - Allene oxide cyclase 3, chloroplast precursor, putative [Ricinus communis]
12 Hb_004774_060 0.1398510682 - - -
13 Hb_000659_010 0.1419726581 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
14 Hb_000748_070 0.1432446972 transcription factor TF Family: WRKY hypothetical protein POPTR_0005s22480g [Populus trichocarpa]
15 Hb_097908_010 0.1442002808 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Jatropha curcas]
16 Hb_000347_550 0.1469373685 transcription factor TF Family: MYB Duplicated homeodomain-like superfamily protein, putative [Theobroma cacao]
17 Hb_001104_200 0.1486435038 - - Phytosulfokine 3 precursor, putative [Theobroma cacao]
18 Hb_175968_010 0.1540079743 - - hypothetical protein JCGZ_21281 [Jatropha curcas]
19 Hb_000204_030 0.1553568098 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
20 Hb_002248_020 0.1554482279 transcription factor TF Family: NAC PREDICTED: transcription factor JUNGBRUNNEN 1-like isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_061195_010 Hb_061195_010 Hb_173448_010 Hb_173448_010 Hb_061195_010--Hb_173448_010 Hb_012239_080 Hb_012239_080 Hb_061195_010--Hb_012239_080 Hb_029510_110 Hb_029510_110 Hb_061195_010--Hb_029510_110 Hb_004055_180 Hb_004055_180 Hb_061195_010--Hb_004055_180 Hb_004195_240 Hb_004195_240 Hb_061195_010--Hb_004195_240 Hb_148435_010 Hb_148435_010 Hb_061195_010--Hb_148435_010 Hb_173448_010--Hb_004195_240 Hb_033363_080 Hb_033363_080 Hb_173448_010--Hb_033363_080 Hb_004774_060 Hb_004774_060 Hb_173448_010--Hb_004774_060 Hb_004222_010 Hb_004222_010 Hb_173448_010--Hb_004222_010 Hb_175968_010 Hb_175968_010 Hb_173448_010--Hb_175968_010 Hb_012239_080--Hb_033363_080 Hb_012239_080--Hb_004055_180 Hb_004712_080 Hb_004712_080 Hb_012239_080--Hb_004712_080 Hb_012239_080--Hb_004774_060 Hb_012239_080--Hb_029510_110 Hb_001104_200 Hb_001104_200 Hb_029510_110--Hb_001104_200 Hb_000204_030 Hb_000204_030 Hb_029510_110--Hb_000204_030 Hb_000563_610 Hb_000563_610 Hb_029510_110--Hb_000563_610 Hb_001366_250 Hb_001366_250 Hb_029510_110--Hb_001366_250 Hb_004055_180--Hb_004774_060 Hb_097908_010 Hb_097908_010 Hb_004055_180--Hb_097908_010 Hb_001464_010 Hb_001464_010 Hb_004055_180--Hb_001464_010 Hb_004055_180--Hb_000563_610 Hb_004055_180--Hb_175968_010 Hb_007417_020 Hb_007417_020 Hb_004055_180--Hb_007417_020 Hb_000347_550 Hb_000347_550 Hb_004195_240--Hb_000347_550 Hb_004195_240--Hb_148435_010 Hb_004195_240--Hb_004774_060 Hb_148914_010 Hb_148914_010 Hb_004195_240--Hb_148914_010 Hb_035583_010 Hb_035583_010 Hb_148435_010--Hb_035583_010 Hb_148435_010--Hb_000347_550 Hb_000748_070 Hb_000748_070 Hb_148435_010--Hb_000748_070 Hb_005000_040 Hb_005000_040 Hb_148435_010--Hb_005000_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.387472 0.471478 2.37342 2.03386 0 0.0408831
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.341163 0.439204 0.0458536 32.3718 2.29767

CAGE analysis