Hb_061361_010

Information

Type -
Description -
Location Contig61361: 234-692
Sequence    

Annotation

kegg
ID rcu:RCOM_0737170
description kinase, putative
nr
ID XP_002527556.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9C9L5
description Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1
trembl
ID B9SNI7
description Kinase, putative OS=Ricinus communis GN=RCOM_0737170 PE=3 SV=1
Gene Ontology
ID GO:0004672
description wall-associated receptor kinase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_061361_010 0.0 - - kinase, putative [Ricinus communis]
2 Hb_000025_770 0.0058186887 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
3 Hb_005066_050 0.0509348032 - - -
4 Hb_001205_280 0.0689216143 - - PREDICTED: probable polyol transporter 6 [Jatropha curcas]
5 Hb_023386_070 0.0721124319 - - PREDICTED: probable pectinesterase 68 [Jatropha curcas]
6 Hb_074674_010 0.0842450735 - - Cell division cycle protein cdt2, putative [Ricinus communis]
7 Hb_000621_100 0.0858631215 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001384_030 0.0867227646 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
9 Hb_010369_020 0.0886309034 - - hypothetical protein JCGZ_21088 [Jatropha curcas]
10 Hb_000176_040 0.1020969693 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHR3 isoform X2 [Jatropha curcas]
11 Hb_000000_040 0.1149181825 - - PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Jatropha curcas]
12 Hb_000163_020 0.1150737577 - - -
13 Hb_006120_140 0.1189473802 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
14 Hb_000347_310 0.1218948326 - - PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like [Jatropha curcas]
15 Hb_003368_070 0.1278020298 - - PREDICTED: uncharacterized protein LOC105109387 [Populus euphratica]
16 Hb_000035_190 0.1282832947 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004631_040 0.1304811106 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
18 Hb_005141_020 0.1346533956 - - laccase, putative [Ricinus communis]
19 Hb_003018_210 0.1362457461 - - PREDICTED: uncharacterized protein LOC105138721 isoform X2 [Populus euphratica]
20 Hb_001699_070 0.1370714279 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_061361_010 Hb_061361_010 Hb_000025_770 Hb_000025_770 Hb_061361_010--Hb_000025_770 Hb_005066_050 Hb_005066_050 Hb_061361_010--Hb_005066_050 Hb_001205_280 Hb_001205_280 Hb_061361_010--Hb_001205_280 Hb_023386_070 Hb_023386_070 Hb_061361_010--Hb_023386_070 Hb_074674_010 Hb_074674_010 Hb_061361_010--Hb_074674_010 Hb_000621_100 Hb_000621_100 Hb_061361_010--Hb_000621_100 Hb_000025_770--Hb_005066_050 Hb_000025_770--Hb_001205_280 Hb_000025_770--Hb_023386_070 Hb_000025_770--Hb_000621_100 Hb_000025_770--Hb_074674_010 Hb_000000_040 Hb_000000_040 Hb_005066_050--Hb_000000_040 Hb_005066_050--Hb_000621_100 Hb_008725_110 Hb_008725_110 Hb_005066_050--Hb_008725_110 Hb_005066_050--Hb_001205_280 Hb_001205_280--Hb_023386_070 Hb_001384_030 Hb_001384_030 Hb_001205_280--Hb_001384_030 Hb_001205_280--Hb_074674_010 Hb_000347_310 Hb_000347_310 Hb_001205_280--Hb_000347_310 Hb_023386_070--Hb_074674_010 Hb_023386_070--Hb_001384_030 Hb_010369_020 Hb_010369_020 Hb_023386_070--Hb_010369_020 Hb_074674_010--Hb_001384_030 Hb_074674_010--Hb_010369_020 Hb_046204_010 Hb_046204_010 Hb_074674_010--Hb_046204_010 Hb_006120_140 Hb_006120_140 Hb_000621_100--Hb_006120_140 Hb_000621_100--Hb_000000_040 Hb_000321_040 Hb_000321_040 Hb_000621_100--Hb_000321_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.426671 0.165859 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0510958 0

CAGE analysis