Hb_061581_010

Information

Type desease resistance
Description Gene Name: ABC_tran
Location Contig61581: 105-344
Sequence    

Annotation

kegg
ID cit:102624748
description ABC transporter G family member 11-like
nr
ID AIU41648.1
description ABC transporter family protein [Hevea brasiliensis]
swissprot
ID Q9C8K2
description ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1
trembl
ID A0A097P9S4
description ABC transporter family protein OS=Hevea brasiliensis GN=ABCG11 PE=2 SV=1
Gene Ontology
ID GO:0016020
description abc transporter g family member 11-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_061581_010 0.0 desease resistance Gene Name: ABC_tran ABC transporter family protein [Hevea brasiliensis]
2 Hb_121236_010 0.1198677204 - - geranyl-diphosphate synthase [Hevea brasiliensis]
3 Hb_135403_010 0.1298020062 - - HEV1.1 [Hevea brasiliensis]
4 Hb_115919_010 0.1421324301 - - unknown [Lotus japonicus]
5 Hb_032531_060 0.1506824962 - - hypothetical protein PRUPE_ppa017035mg, partial [Prunus persica]
6 Hb_001095_060 0.1717492364 - - Uncharacterized protein TCM_012505 [Theobroma cacao]
7 Hb_034579_010 0.1876930492 - - PREDICTED: nudix hydrolase 27, chloroplastic [Jatropha curcas]
8 Hb_008277_030 0.1980074656 - - hypothetical protein CICLE_v10024419mg, partial [Citrus clementina]
9 Hb_073559_010 0.1995970712 - - PREDICTED: probable beta-1,3-galactosyltransferase 12 [Jatropha curcas]
10 Hb_027445_060 0.2100985631 - - PREDICTED: pescadillo homolog isoform X1 [Jatropha curcas]
11 Hb_005305_060 0.2121774025 - - hypothetical protein MIMGU_mgv1a015111mg [Erythranthe guttata]
12 Hb_124587_010 0.2176979464 - - PREDICTED: importin-5-like [Musa acuminata subsp. malaccensis]
13 Hb_005731_140 0.2198622681 - - hypothetical protein JCGZ_26808 [Jatropha curcas]
14 Hb_000122_030 0.2204352092 - - PREDICTED: uncharacterized protein LOC104606081, partial [Nelumbo nucifera]
15 Hb_168737_010 0.2206028846 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_000832_240 0.2247661046 - - conserved hypothetical protein [Ricinus communis]
17 Hb_166548_010 0.2251030054 - - hypothetical protein JCGZ_09681 [Jatropha curcas]
18 Hb_007124_010 0.2296741102 - - unnamed protein product [Coffea canephora]
19 Hb_001310_070 0.2298630828 - - PREDICTED: uncharacterized protein LOC105639838 [Jatropha curcas]
20 Hb_106005_010 0.2301990831 - - EG5651 [Manihot esculenta]

Gene co-expression network

sample Hb_061581_010 Hb_061581_010 Hb_121236_010 Hb_121236_010 Hb_061581_010--Hb_121236_010 Hb_135403_010 Hb_135403_010 Hb_061581_010--Hb_135403_010 Hb_115919_010 Hb_115919_010 Hb_061581_010--Hb_115919_010 Hb_032531_060 Hb_032531_060 Hb_061581_010--Hb_032531_060 Hb_001095_060 Hb_001095_060 Hb_061581_010--Hb_001095_060 Hb_034579_010 Hb_034579_010 Hb_061581_010--Hb_034579_010 Hb_121236_010--Hb_115919_010 Hb_027445_060 Hb_027445_060 Hb_121236_010--Hb_027445_060 Hb_121236_010--Hb_001095_060 Hb_005305_060 Hb_005305_060 Hb_121236_010--Hb_005305_060 Hb_121236_010--Hb_135403_010 Hb_001488_110 Hb_001488_110 Hb_135403_010--Hb_001488_110 Hb_135403_010--Hb_001095_060 Hb_000122_030 Hb_000122_030 Hb_135403_010--Hb_000122_030 Hb_135403_010--Hb_115919_010 Hb_115919_010--Hb_027445_060 Hb_115919_010--Hb_001095_060 Hb_115919_010--Hb_005305_060 Hb_115919_010--Hb_000122_030 Hb_032531_060--Hb_034579_010 Hb_005731_140 Hb_005731_140 Hb_032531_060--Hb_005731_140 Hb_124141_010 Hb_124141_010 Hb_032531_060--Hb_124141_010 Hb_000248_030 Hb_000248_030 Hb_032531_060--Hb_000248_030 Hb_005933_010 Hb_005933_010 Hb_032531_060--Hb_005933_010 Hb_001095_060--Hb_027445_060 Hb_068946_010 Hb_068946_010 Hb_001095_060--Hb_068946_010 Hb_001095_060--Hb_001488_110 Hb_034579_010--Hb_005731_140 Hb_034579_010--Hb_124141_010 Hb_000002_030 Hb_000002_030 Hb_034579_010--Hb_000002_030 Hb_034579_010--Hb_005933_010 Hb_168737_010 Hb_168737_010 Hb_034579_010--Hb_168737_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
236.364 4.49281 1.05555 96.958 128.905 2318.13
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
570.317 430.932 221.615 24.0903 1.49942

CAGE analysis