Hb_061590_010

Information

Type -
Description -
Location Contig61590: 2428-7048
Sequence    

Annotation

kegg
ID pop:POPTR_0011s10430g
description hypothetical protein
nr
ID KDP23642.1
description hypothetical protein JCGZ_23475 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067JID2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23475 PE=4 SV=1
Gene Ontology
ID GO:0016772
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_061590_010 0.0 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
2 Hb_005726_030 0.0012890217 - - hypothetical protein CISIN_1g020511mg [Citrus sinensis]
3 Hb_187247_010 0.0128725195 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
4 Hb_007337_010 0.0243487181 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
5 Hb_143766_040 0.0257954867 - - PREDICTED: probable caffeoyl-CoA O-methyltransferase At4g26220 [Jatropha curcas]
6 Hb_004981_020 0.028705359 - - PREDICTED: uncharacterized protein LOC103706119 [Phoenix dactylifera]
7 Hb_007437_010 0.036104605 - - Polygalacturonase precursor, putative [Ricinus communis]
8 Hb_106528_020 0.0413437853 - - Cationic peroxidase 2 precursor [Theobroma cacao]
9 Hb_038238_010 0.0422621291 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
10 Hb_006415_020 0.0464293891 - - PREDICTED: nucleobase-ascorbate transporter 4-like [Jatropha curcas]
11 Hb_010358_010 0.0613579984 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
12 Hb_126040_020 0.0636513838 - - -
13 Hb_000201_080 0.0685683621 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
14 Hb_000692_270 0.0714772342 - - PREDICTED: ornithine decarboxylase-like [Jatropha curcas]
15 Hb_153208_010 0.0728847491 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
16 Hb_001604_140 0.073178336 - - PREDICTED: ABC transporter G family member 10-like [Populus euphratica]
17 Hb_002944_020 0.0734185057 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
18 Hb_000828_030 0.0755468964 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
19 Hb_020141_020 0.075916002 - - -
20 Hb_003685_060 0.075956001 - - PREDICTED: laccase-15 [Jatropha curcas]

Gene co-expression network

sample Hb_061590_010 Hb_061590_010 Hb_005726_030 Hb_005726_030 Hb_061590_010--Hb_005726_030 Hb_187247_010 Hb_187247_010 Hb_061590_010--Hb_187247_010 Hb_007337_010 Hb_007337_010 Hb_061590_010--Hb_007337_010 Hb_143766_040 Hb_143766_040 Hb_061590_010--Hb_143766_040 Hb_004981_020 Hb_004981_020 Hb_061590_010--Hb_004981_020 Hb_007437_010 Hb_007437_010 Hb_061590_010--Hb_007437_010 Hb_005726_030--Hb_187247_010 Hb_005726_030--Hb_007337_010 Hb_005726_030--Hb_143766_040 Hb_005726_030--Hb_004981_020 Hb_005726_030--Hb_007437_010 Hb_187247_010--Hb_007337_010 Hb_187247_010--Hb_143766_040 Hb_187247_010--Hb_004981_020 Hb_106528_020 Hb_106528_020 Hb_187247_010--Hb_106528_020 Hb_007337_010--Hb_143766_040 Hb_007337_010--Hb_004981_020 Hb_126040_020 Hb_126040_020 Hb_007337_010--Hb_126040_020 Hb_143766_040--Hb_004981_020 Hb_143766_040--Hb_126040_020 Hb_004981_020--Hb_126040_020 Hb_006415_020 Hb_006415_020 Hb_007437_010--Hb_006415_020 Hb_038238_010 Hb_038238_010 Hb_007437_010--Hb_038238_010 Hb_007437_010--Hb_187247_010 Hb_007437_010--Hb_106528_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00554214 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.23834 0

CAGE analysis