Hb_062522_010

Information

Type -
Description -
Location Contig62522: 1204-1921
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_062522_010 0.0 - - -
2 Hb_000107_510 0.1213035174 - - phosphate transporter [Manihot esculenta]
3 Hb_004257_010 0.1490936163 - - CMP-sialic acid transporter, putative [Ricinus communis]
4 Hb_002174_040 0.1628955601 - - DNAJ heat shock family protein [Theobroma cacao]
5 Hb_000789_120 0.1636913424 - - PREDICTED: derlin-1 isoform X1 [Jatropha curcas]
6 Hb_001242_080 0.1641433966 - - PREDICTED: UDP-galactose transporter 2-like [Populus euphratica]
7 Hb_012244_010 0.1650939996 - - PREDICTED: uncharacterized protein LOC105641034 [Jatropha curcas]
8 Hb_001663_040 0.1661907994 - - hypothetical protein B456_007G162000 [Gossypium raimondii]
9 Hb_002184_090 0.1675388759 - - DNA binding protein, putative [Ricinus communis]
10 Hb_000181_350 0.1716421279 - - PREDICTED: uncharacterized protein LOC105111090 [Populus euphratica]
11 Hb_007101_110 0.1740051091 - - PREDICTED: nucleobase-ascorbate transporter 7 [Jatropha curcas]
12 Hb_166574_010 0.1764082475 - - PREDICTED: LAG1 longevity assurance homolog 2 [Jatropha curcas]
13 Hb_000120_770 0.1765870788 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000032_370 0.1768709391 - - PREDICTED: nucleoside diphosphate kinase III, chloroplastic/mitochondrial-like [Citrus sinensis]
15 Hb_006903_030 0.1788592797 - - PREDICTED: uncharacterized protein LOC105640666 [Jatropha curcas]
16 Hb_001153_120 0.1806623468 - - PREDICTED: bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Jatropha curcas]
17 Hb_025466_010 0.1826469842 - - unnamed protein product [Vitis vinifera]
18 Hb_000617_200 0.1837806718 - - f-actin capping protein alpha, putative [Ricinus communis]
19 Hb_000329_210 0.1840574756 - - Golgi snare 12 isoform 1 [Theobroma cacao]
20 Hb_000240_030 0.1844512034 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_062522_010 Hb_062522_010 Hb_000107_510 Hb_000107_510 Hb_062522_010--Hb_000107_510 Hb_004257_010 Hb_004257_010 Hb_062522_010--Hb_004257_010 Hb_002174_040 Hb_002174_040 Hb_062522_010--Hb_002174_040 Hb_000789_120 Hb_000789_120 Hb_062522_010--Hb_000789_120 Hb_001242_080 Hb_001242_080 Hb_062522_010--Hb_001242_080 Hb_012244_010 Hb_012244_010 Hb_062522_010--Hb_012244_010 Hb_000167_050 Hb_000167_050 Hb_000107_510--Hb_000167_050 Hb_031527_110 Hb_031527_110 Hb_000107_510--Hb_031527_110 Hb_000365_370 Hb_000365_370 Hb_000107_510--Hb_000365_370 Hb_001904_050 Hb_001904_050 Hb_000107_510--Hb_001904_050 Hb_000107_510--Hb_002174_040 Hb_000329_210 Hb_000329_210 Hb_004257_010--Hb_000329_210 Hb_002392_010 Hb_002392_010 Hb_004257_010--Hb_002392_010 Hb_002184_090 Hb_002184_090 Hb_004257_010--Hb_002184_090 Hb_001195_060 Hb_001195_060 Hb_004257_010--Hb_001195_060 Hb_005167_010 Hb_005167_010 Hb_004257_010--Hb_005167_010 Hb_001892_070 Hb_001892_070 Hb_004257_010--Hb_001892_070 Hb_002174_040--Hb_031527_110 Hb_012573_050 Hb_012573_050 Hb_002174_040--Hb_012573_050 Hb_000181_350 Hb_000181_350 Hb_002174_040--Hb_000181_350 Hb_001663_040 Hb_001663_040 Hb_002174_040--Hb_001663_040 Hb_011224_100 Hb_011224_100 Hb_002174_040--Hb_011224_100 Hb_002174_040--Hb_002184_090 Hb_000789_120--Hb_001663_040 Hb_121089_040 Hb_121089_040 Hb_000789_120--Hb_121089_040 Hb_000116_130 Hb_000116_130 Hb_000789_120--Hb_000116_130 Hb_000049_180 Hb_000049_180 Hb_000789_120--Hb_000049_180 Hb_001946_380 Hb_001946_380 Hb_000789_120--Hb_001946_380 Hb_001976_030 Hb_001976_030 Hb_000789_120--Hb_001976_030 Hb_000120_770 Hb_000120_770 Hb_001242_080--Hb_000120_770 Hb_002876_020 Hb_002876_020 Hb_001242_080--Hb_002876_020 Hb_001242_080--Hb_001892_070 Hb_001242_080--Hb_002392_010 Hb_003106_100 Hb_003106_100 Hb_001242_080--Hb_003106_100 Hb_001575_060 Hb_001575_060 Hb_001242_080--Hb_001575_060 Hb_011249_020 Hb_011249_020 Hb_012244_010--Hb_011249_020 Hb_012244_010--Hb_002392_010 Hb_012244_010--Hb_004257_010 Hb_001153_120 Hb_001153_120 Hb_012244_010--Hb_001153_120 Hb_180343_010 Hb_180343_010 Hb_012244_010--Hb_180343_010 Hb_000240_030 Hb_000240_030 Hb_012244_010--Hb_000240_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.198735 0 1.3894 2.20812 0.389414 0.36201
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.41917 1.115 1.44443 0.487376 1.58213

CAGE analysis