Hb_062585_010

Information

Type -
Description -
Location Contig62585: 141-658
Sequence    

Annotation

kegg
ID rcu:RCOM_1045150
description TMV resistance protein N, putative
nr
ID KDP28981.1
description hypothetical protein JCGZ_19532 [Jatropha curcas]
swissprot
ID Q9SZ67
description Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1
trembl
ID A0A067JYD2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19532 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_062585_010 0.0 - - hypothetical protein JCGZ_19532 [Jatropha curcas]
2 Hb_001396_170 0.1778306469 - - unnamed protein product [Vitis vinifera]
3 Hb_000003_390 0.2758357845 - - hypothetical protein POPTR_0003s20040g [Populus trichocarpa]
4 Hb_000574_150 0.2762491746 - - PREDICTED: protein SRG1-like [Jatropha curcas]
5 Hb_002804_050 0.2777811743 - - PREDICTED: uncharacterized protein LOC105628258 [Jatropha curcas]
6 Hb_005504_010 0.2779749989 - - hypothetical protein POPTR_1605s00200g [Populus trichocarpa]
7 Hb_002735_040 0.2823053758 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
8 Hb_000270_560 0.2846722072 - - PREDICTED: U-box domain-containing protein 38-like [Jatropha curcas]
9 Hb_000347_500 0.2884135674 transcription factor TF Family: GRF conserved hypothetical protein [Ricinus communis]
10 Hb_006615_100 0.28847482 - - PREDICTED: uncharacterized protein LOC105640683 isoform X1 [Jatropha curcas]
11 Hb_012188_010 0.2915639434 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
12 Hb_001217_060 0.2921431198 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
13 Hb_001749_010 0.2970100687 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
14 Hb_105085_010 0.2974722412 - - hypothetical protein JCGZ_05865 [Jatropha curcas]
15 Hb_005702_030 0.2987310673 - - PREDICTED: TMV resistance protein N-like isoform X2 [Vitis vinifera]
16 Hb_000243_020 0.299975885 - - -
17 Hb_007680_020 0.300510738 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
18 Hb_032076_010 0.3051600757 - - -
19 Hb_151628_010 0.3057622431 - - PREDICTED: choline monooxygenase, chloroplastic isoform X2 [Jatropha curcas]
20 Hb_000976_380 0.3080182399 - - PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_062585_010 Hb_062585_010 Hb_001396_170 Hb_001396_170 Hb_062585_010--Hb_001396_170 Hb_000003_390 Hb_000003_390 Hb_062585_010--Hb_000003_390 Hb_000574_150 Hb_000574_150 Hb_062585_010--Hb_000574_150 Hb_002804_050 Hb_002804_050 Hb_062585_010--Hb_002804_050 Hb_005504_010 Hb_005504_010 Hb_062585_010--Hb_005504_010 Hb_002735_040 Hb_002735_040 Hb_062585_010--Hb_002735_040 Hb_181975_010 Hb_181975_010 Hb_001396_170--Hb_181975_010 Hb_001396_170--Hb_000574_150 Hb_007978_020 Hb_007978_020 Hb_001396_170--Hb_007978_020 Hb_023647_040 Hb_023647_040 Hb_001396_170--Hb_023647_040 Hb_001396_170--Hb_000003_390 Hb_007257_050 Hb_007257_050 Hb_000003_390--Hb_007257_050 Hb_003157_010 Hb_003157_010 Hb_000003_390--Hb_003157_010 Hb_000997_410 Hb_000997_410 Hb_000003_390--Hb_000997_410 Hb_000375_370 Hb_000375_370 Hb_000003_390--Hb_000375_370 Hb_009028_030 Hb_009028_030 Hb_000003_390--Hb_009028_030 Hb_006501_020 Hb_006501_020 Hb_000003_390--Hb_006501_020 Hb_000574_150--Hb_007978_020 Hb_000574_150--Hb_181975_010 Hb_000574_150--Hb_000003_390 Hb_000574_150--Hb_007257_050 Hb_007680_020 Hb_007680_020 Hb_000574_150--Hb_007680_020 Hb_006615_100 Hb_006615_100 Hb_002804_050--Hb_006615_100 Hb_001529_060 Hb_001529_060 Hb_002804_050--Hb_001529_060 Hb_002849_080 Hb_002849_080 Hb_002804_050--Hb_002849_080 Hb_002783_050 Hb_002783_050 Hb_002804_050--Hb_002783_050 Hb_003106_150 Hb_003106_150 Hb_002804_050--Hb_003106_150 Hb_010128_070 Hb_010128_070 Hb_002804_050--Hb_010128_070 Hb_101040_010 Hb_101040_010 Hb_005504_010--Hb_101040_010 Hb_032076_010 Hb_032076_010 Hb_005504_010--Hb_032076_010 Hb_000071_200 Hb_000071_200 Hb_005504_010--Hb_000071_200 Hb_001676_030 Hb_001676_030 Hb_005504_010--Hb_001676_030 Hb_012188_010 Hb_012188_010 Hb_005504_010--Hb_012188_010 Hb_063433_010 Hb_063433_010 Hb_005504_010--Hb_063433_010 Hb_105085_010 Hb_105085_010 Hb_002735_040--Hb_105085_010 Hb_002735_040--Hb_002804_050 Hb_002735_040--Hb_006615_100 Hb_002843_050 Hb_002843_050 Hb_002735_040--Hb_002843_050 Hb_005122_060 Hb_005122_060 Hb_002735_040--Hb_005122_060 Hb_012384_050 Hb_012384_050 Hb_002735_040--Hb_012384_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.64813 5.17886 0.165014 0.480991 0.390717 2.84319
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.246205 0.193457 0.597174 0.85029 0

CAGE analysis