Hb_062741_010

Information

Type -
Description -
Location Contig62741: 400-618
Sequence    

Annotation

kegg
ID pda:103696607
description uncharacterized LOC103696607
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_062741_010 0.0 - - -
2 Hb_004195_260 0.2195961726 desease resistance Gene Name: NB-ARC Disease resistance protein RPH8A, putative [Ricinus communis]
3 Hb_005241_020 0.2540261504 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
4 Hb_153142_010 0.266220101 - - PREDICTED: uncharacterized protein LOC105636643 [Jatropha curcas]
5 Hb_188319_010 0.2908494444 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
6 Hb_183574_010 0.2929205993 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
7 Hb_001160_010 0.3025953292 - - -
8 Hb_114010_020 0.3208872095 - - -
9 Hb_006674_020 0.3219194956 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_005451_020 0.3356944634 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
11 Hb_184746_010 0.3438253221 - - HSP20-like chaperones superfamily protein [Theobroma cacao]
12 Hb_021068_010 0.3571423712 - - PREDICTED: MADS-box transcription factor 23-like isoform X1 [Jatropha curcas]
13 Hb_005081_040 0.365535002 - - -
14 Hb_007659_010 0.3699816354 - - PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Jatropha curcas]
15 Hb_118014_010 0.3737840782 - - PREDICTED: uncharacterized protein LOC104214283 [Nicotiana sylvestris]
16 Hb_007044_280 0.3739168611 - - PREDICTED: uncharacterized protein LOC105123357 [Populus euphratica]
17 Hb_018591_040 0.3766790138 - - PREDICTED: protein VAC14 homolog [Jatropha curcas]
18 Hb_009973_020 0.3782418679 - - PREDICTED: uncharacterized protein LOC104889111 [Beta vulgaris subsp. vulgaris]
19 Hb_078901_020 0.3783427294 - - PREDICTED: uncharacterized protein LOC105648117 [Jatropha curcas]
20 Hb_010775_050 0.3823872389 - - -

Gene co-expression network

sample Hb_062741_010 Hb_062741_010 Hb_004195_260 Hb_004195_260 Hb_062741_010--Hb_004195_260 Hb_005241_020 Hb_005241_020 Hb_062741_010--Hb_005241_020 Hb_153142_010 Hb_153142_010 Hb_062741_010--Hb_153142_010 Hb_188319_010 Hb_188319_010 Hb_062741_010--Hb_188319_010 Hb_183574_010 Hb_183574_010 Hb_062741_010--Hb_183574_010 Hb_001160_010 Hb_001160_010 Hb_062741_010--Hb_001160_010 Hb_004195_260--Hb_188319_010 Hb_004195_260--Hb_153142_010 Hb_114010_020 Hb_114010_020 Hb_004195_260--Hb_114010_020 Hb_005451_020 Hb_005451_020 Hb_004195_260--Hb_005451_020 Hb_006674_020 Hb_006674_020 Hb_004195_260--Hb_006674_020 Hb_005241_020--Hb_183574_010 Hb_001969_050 Hb_001969_050 Hb_005241_020--Hb_001969_050 Hb_004041_010 Hb_004041_010 Hb_005241_020--Hb_004041_010 Hb_007044_280 Hb_007044_280 Hb_005241_020--Hb_007044_280 Hb_018591_040 Hb_018591_040 Hb_005241_020--Hb_018591_040 Hb_153142_010--Hb_188319_010 Hb_153142_010--Hb_114010_020 Hb_000402_140 Hb_000402_140 Hb_153142_010--Hb_000402_140 Hb_153142_010--Hb_006674_020 Hb_005140_010 Hb_005140_010 Hb_153142_010--Hb_005140_010 Hb_188319_010--Hb_114010_020 Hb_188319_010--Hb_000402_140 Hb_188319_010--Hb_006674_020 Hb_188319_010--Hb_005140_010 Hb_001709_130 Hb_001709_130 Hb_183574_010--Hb_001709_130 Hb_021068_010 Hb_021068_010 Hb_183574_010--Hb_021068_010 Hb_004361_020 Hb_004361_020 Hb_183574_010--Hb_004361_020 Hb_005989_010 Hb_005989_010 Hb_183574_010--Hb_005989_010 Hb_047661_010 Hb_047661_010 Hb_183574_010--Hb_047661_010 Hb_001160_010--Hb_005451_020 Hb_005356_060 Hb_005356_060 Hb_001160_010--Hb_005356_060 Hb_000101_280 Hb_000101_280 Hb_001160_010--Hb_000101_280 Hb_000140_430 Hb_000140_430 Hb_001160_010--Hb_000140_430 Hb_001160_010--Hb_153142_010 Hb_001160_010--Hb_021068_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 1.54977 2.8464
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.93808

CAGE analysis