Hb_062904_010

Information

Type -
Description -
Location Contig62904: 2778-3536
Sequence    

Annotation

kegg
ID rcu:RCOM_0725500
description hypothetical protein
nr
ID XP_002524902.1
description hypothetical protein RCOM_0725500 [Ricinus communis]
swissprot
ID Q5BQ05
description Uncharacterized protein At1g18380 OS=Arabidopsis thaliana GN=At1g18380 PE=2 SV=1
trembl
ID B9SFY3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0725500 PE=4 SV=1
Gene Ontology
ID GO:0005488
description probable serine threonine-protein kinase at1g18390

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_062904_010 0.0 - - hypothetical protein RCOM_0725500 [Ricinus communis]
2 Hb_000412_030 0.1069290806 - - glycosyl hydrolase family 35 family protein [Populus trichocarpa]
3 Hb_000614_340 0.157842586 - - Salutaridinol 7-O-acetyltransferase, putative [Ricinus communis]
4 Hb_006446_070 0.1667364568 - - Zinc-binding dehydrogenase family protein [Theobroma cacao]
5 Hb_000039_070 0.1786118087 transcription factor TF Family: MYB MYB21, putative [Theobroma cacao]
6 Hb_007769_010 0.2000864381 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_000976_070 0.2033909448 - - gulonolactone oxidase, putative [Ricinus communis]
8 Hb_006124_010 0.212020481 - - -
9 Hb_161981_020 0.2121434231 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_176138_010 0.2123190278 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
11 Hb_006810_080 0.212331569 - - hypothetical protein EUGRSUZ_C015472, partial [Eucalyptus grandis]
12 Hb_021931_030 0.2123759282 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
13 Hb_022693_100 0.2126487936 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
14 Hb_000866_480 0.2127162844 - - -
15 Hb_110822_020 0.2134392291 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
16 Hb_002081_250 0.2135026366 - - hypothetical protein POPTR_0009s08940g [Populus trichocarpa]
17 Hb_170761_010 0.2135141382 - - PREDICTED: uncharacterized protein LOC105787794 [Gossypium raimondii]
18 Hb_009230_030 0.2135675964 - - -
19 Hb_000286_250 0.2135826769 desease resistance Gene Name: NB-ARC -
20 Hb_002200_010 0.2137908439 - - PREDICTED: sperm acrosomal protein FSA-ACR.1-like [Jatropha curcas]

Gene co-expression network

sample Hb_062904_010 Hb_062904_010 Hb_000412_030 Hb_000412_030 Hb_062904_010--Hb_000412_030 Hb_000614_340 Hb_000614_340 Hb_062904_010--Hb_000614_340 Hb_006446_070 Hb_006446_070 Hb_062904_010--Hb_006446_070 Hb_000039_070 Hb_000039_070 Hb_062904_010--Hb_000039_070 Hb_007769_010 Hb_007769_010 Hb_062904_010--Hb_007769_010 Hb_000976_070 Hb_000976_070 Hb_062904_010--Hb_000976_070 Hb_000412_030--Hb_000039_070 Hb_012652_020 Hb_012652_020 Hb_000412_030--Hb_012652_020 Hb_000412_030--Hb_006446_070 Hb_000412_030--Hb_000614_340 Hb_000010_120 Hb_000010_120 Hb_000412_030--Hb_000010_120 Hb_000614_340--Hb_006446_070 Hb_000526_130 Hb_000526_130 Hb_000614_340--Hb_000526_130 Hb_009230_030 Hb_009230_030 Hb_000614_340--Hb_009230_030 Hb_003724_030 Hb_003724_030 Hb_000614_340--Hb_003724_030 Hb_001504_290 Hb_001504_290 Hb_000614_340--Hb_001504_290 Hb_000866_480 Hb_000866_480 Hb_000614_340--Hb_000866_480 Hb_176138_010 Hb_176138_010 Hb_006446_070--Hb_176138_010 Hb_006810_080 Hb_006810_080 Hb_006446_070--Hb_006810_080 Hb_006124_010 Hb_006124_010 Hb_006446_070--Hb_006124_010 Hb_022693_100 Hb_022693_100 Hb_006446_070--Hb_022693_100 Hb_006446_070--Hb_000866_480 Hb_000039_070--Hb_012652_020 Hb_000039_070--Hb_006446_070 Hb_000039_070--Hb_000614_340 Hb_001114_290 Hb_001114_290 Hb_000039_070--Hb_001114_290 Hb_005747_040 Hb_005747_040 Hb_000039_070--Hb_005747_040 Hb_021931_030 Hb_021931_030 Hb_007769_010--Hb_021931_030 Hb_161981_020 Hb_161981_020 Hb_007769_010--Hb_161981_020 Hb_007769_010--Hb_006124_010 Hb_110822_020 Hb_110822_020 Hb_007769_010--Hb_110822_020 Hb_002081_250 Hb_002081_250 Hb_007769_010--Hb_002081_250 Hb_170761_010 Hb_170761_010 Hb_007769_010--Hb_170761_010 Hb_000976_070--Hb_000614_340 Hb_000976_070--Hb_000039_070 Hb_003992_250 Hb_003992_250 Hb_000976_070--Hb_003992_250 Hb_000976_070--Hb_006446_070 Hb_000976_070--Hb_000412_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.368321 0 0 0 0.0634072
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0825462 0 0 1.16246 0

CAGE analysis