Hb_063523_010

Information

Type -
Description -
Location Contig63523: 106-642
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_063523_010 0.0 - - -
2 Hb_187991_010 0.0697762596 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
3 Hb_000359_280 0.0708918518 - - hypothetical protein OsI_15300 [Oryza sativa Indica Group]
4 Hb_001102_270 0.0998092969 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
5 Hb_033045_010 0.1110336508 - - copine, putative [Ricinus communis]
6 Hb_107809_010 0.1180532623 - - JHL06P13.14 [Jatropha curcas]
7 Hb_031862_020 0.1186042333 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
8 Hb_000008_080 0.1299377273 - - conserved hypothetical protein [Ricinus communis]
9 Hb_005542_040 0.1377521465 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
10 Hb_006925_060 0.1384623904 - - hypothetical protein JCGZ_20651 [Jatropha curcas]
11 Hb_000265_020 0.1390432858 - - hypothetical protein POPTR_0011s16980g, partial [Populus trichocarpa]
12 Hb_001634_080 0.1404368022 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
13 Hb_075449_040 0.1432367751 - - PREDICTED: meiotic recombination protein SPO11-1 [Jatropha curcas]
14 Hb_000163_250 0.1435515456 - - unnamed protein product [Vitis vinifera]
15 Hb_000108_090 0.1437511424 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB5-like [Jatropha curcas]
16 Hb_000501_040 0.1447713885 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_008783_020 0.1503687106 - - hypothetical protein JCGZ_21284 [Jatropha curcas]
18 Hb_006970_150 0.1531223111 - - PREDICTED: uncharacterized protein LOC105650471 [Jatropha curcas]
19 Hb_007765_140 0.1548469802 - - PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
20 Hb_029576_100 0.1579106317 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 31 [Jatropha curcas]

Gene co-expression network

sample Hb_063523_010 Hb_063523_010 Hb_187991_010 Hb_187991_010 Hb_063523_010--Hb_187991_010 Hb_000359_280 Hb_000359_280 Hb_063523_010--Hb_000359_280 Hb_001102_270 Hb_001102_270 Hb_063523_010--Hb_001102_270 Hb_033045_010 Hb_033045_010 Hb_063523_010--Hb_033045_010 Hb_107809_010 Hb_107809_010 Hb_063523_010--Hb_107809_010 Hb_031862_020 Hb_031862_020 Hb_063523_010--Hb_031862_020 Hb_187991_010--Hb_000359_280 Hb_187991_010--Hb_001102_270 Hb_187991_010--Hb_031862_020 Hb_005542_040 Hb_005542_040 Hb_187991_010--Hb_005542_040 Hb_000008_080 Hb_000008_080 Hb_187991_010--Hb_000008_080 Hb_000359_280--Hb_001102_270 Hb_008783_020 Hb_008783_020 Hb_000359_280--Hb_008783_020 Hb_000359_280--Hb_000008_080 Hb_007765_140 Hb_007765_140 Hb_000359_280--Hb_007765_140 Hb_001102_270--Hb_008783_020 Hb_001355_110 Hb_001355_110 Hb_001102_270--Hb_001355_110 Hb_001102_270--Hb_007765_140 Hb_000265_020 Hb_000265_020 Hb_033045_010--Hb_000265_020 Hb_006970_150 Hb_006970_150 Hb_033045_010--Hb_006970_150 Hb_000489_020 Hb_000489_020 Hb_033045_010--Hb_000489_020 Hb_003337_050 Hb_003337_050 Hb_033045_010--Hb_003337_050 Hb_033045_010--Hb_031862_020 Hb_107809_010--Hb_005542_040 Hb_001634_080 Hb_001634_080 Hb_107809_010--Hb_001634_080 Hb_107809_010--Hb_008783_020 Hb_000108_090 Hb_000108_090 Hb_107809_010--Hb_000108_090 Hb_005276_220 Hb_005276_220 Hb_107809_010--Hb_005276_220 Hb_000521_360 Hb_000521_360 Hb_107809_010--Hb_000521_360 Hb_167272_010 Hb_167272_010 Hb_031862_020--Hb_167272_010 Hb_000237_070 Hb_000237_070 Hb_031862_020--Hb_000237_070 Hb_000501_040 Hb_000501_040 Hb_031862_020--Hb_000501_040 Hb_000085_220 Hb_000085_220 Hb_031862_020--Hb_000085_220 Hb_000382_030 Hb_000382_030 Hb_031862_020--Hb_000382_030 Hb_007420_010 Hb_007420_010 Hb_031862_020--Hb_007420_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.33983 1.63663 0.419251 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.15321 0.641611

CAGE analysis