Hb_063866_010

Information

Type -
Description -
Location Contig63866: 2-918
Sequence    

Annotation

kegg
ID rcu:RCOM_1322050
description hypothetical protein
nr
ID XP_012070422.1
description PREDICTED: uncharacterized protein LOC105632605 [Jatropha curcas]
swissprot
ID Q15034
description Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1
trembl
ID A0A067L5B2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02700 PE=4 SV=1
Gene Ontology
ID GO:0016301
description inhibitor of bruton tyrosine kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_063866_010 0.0 - - PREDICTED: uncharacterized protein LOC105632605 [Jatropha curcas]
2 Hb_031330_020 0.1505864745 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
3 Hb_011053_020 0.1551534531 - - lipoic acid synthetase, putative [Ricinus communis]
4 Hb_183963_010 0.1649587567 - - core region of GTP cyclohydrolase I family protein [Populus trichocarpa]
5 Hb_002527_040 0.1755694702 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein 2, lrrc2, putative [Ricinus communis]
6 Hb_002894_090 0.1821559865 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase [Jatropha curcas]
7 Hb_007933_030 0.1846841701 - - PREDICTED: uncharacterized protein LOC105639932 [Jatropha curcas]
8 Hb_001916_150 0.1868325691 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-3 [Vitis vinifera]
9 Hb_003494_130 0.1884611221 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 9-like [Jatropha curcas]
10 Hb_026314_030 0.1904885891 - - PREDICTED: transmembrane protein 41B [Jatropha curcas]
11 Hb_000975_170 0.1953233176 - - PREDICTED: UDP-glucuronic acid decarboxylase 6 isoform X1 [Jatropha curcas]
12 Hb_003778_020 0.1955935703 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
13 Hb_000975_050 0.1973528496 - - PREDICTED: inner membrane protein PPF-1, chloroplastic [Jatropha curcas]
14 Hb_000300_680 0.200047848 - - PREDICTED: uncharacterized protein LOC105632625 isoform X1 [Jatropha curcas]
15 Hb_001124_230 0.2054397916 - - PREDICTED: divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic [Jatropha curcas]
16 Hb_011287_070 0.205537998 - - -
17 Hb_000122_260 0.2072452502 transcription factor TF Family: SNF2 PREDICTED: SNF2 domain-containing protein CLASSY 1-like [Jatropha curcas]
18 Hb_020400_020 0.2083975637 - - starch synthase isoform II [Manihot esculenta]
19 Hb_001793_030 0.2090489125 - - Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
20 Hb_003226_250 0.2099242893 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_063866_010 Hb_063866_010 Hb_031330_020 Hb_031330_020 Hb_063866_010--Hb_031330_020 Hb_011053_020 Hb_011053_020 Hb_063866_010--Hb_011053_020 Hb_183963_010 Hb_183963_010 Hb_063866_010--Hb_183963_010 Hb_002527_040 Hb_002527_040 Hb_063866_010--Hb_002527_040 Hb_002894_090 Hb_002894_090 Hb_063866_010--Hb_002894_090 Hb_007933_030 Hb_007933_030 Hb_063866_010--Hb_007933_030 Hb_000300_680 Hb_000300_680 Hb_031330_020--Hb_000300_680 Hb_001916_150 Hb_001916_150 Hb_031330_020--Hb_001916_150 Hb_003778_020 Hb_003778_020 Hb_031330_020--Hb_003778_020 Hb_000975_050 Hb_000975_050 Hb_031330_020--Hb_000975_050 Hb_134813_010 Hb_134813_010 Hb_031330_020--Hb_134813_010 Hb_031330_020--Hb_011053_020 Hb_011053_020--Hb_183963_010 Hb_007002_010 Hb_007002_010 Hb_011053_020--Hb_007002_010 Hb_000012_010 Hb_000012_010 Hb_011053_020--Hb_000012_010 Hb_000023_210 Hb_000023_210 Hb_011053_020--Hb_000023_210 Hb_000866_050 Hb_000866_050 Hb_011053_020--Hb_000866_050 Hb_000189_520 Hb_000189_520 Hb_011053_020--Hb_000189_520 Hb_005228_040 Hb_005228_040 Hb_183963_010--Hb_005228_040 Hb_183963_010--Hb_000866_050 Hb_026314_030 Hb_026314_030 Hb_183963_010--Hb_026314_030 Hb_011053_030 Hb_011053_030 Hb_183963_010--Hb_011053_030 Hb_183963_010--Hb_000023_210 Hb_000086_390 Hb_000086_390 Hb_002527_040--Hb_000086_390 Hb_002780_030 Hb_002780_030 Hb_002527_040--Hb_002780_030 Hb_002527_040--Hb_001916_150 Hb_002527_040--Hb_026314_030 Hb_000032_400 Hb_000032_400 Hb_002527_040--Hb_000032_400 Hb_008179_010 Hb_008179_010 Hb_002527_040--Hb_008179_010 Hb_000122_260 Hb_000122_260 Hb_002894_090--Hb_000122_260 Hb_000069_370 Hb_000069_370 Hb_002894_090--Hb_000069_370 Hb_001266_160 Hb_001266_160 Hb_002894_090--Hb_001266_160 Hb_002894_090--Hb_011053_030 Hb_000359_160 Hb_000359_160 Hb_002894_090--Hb_000359_160 Hb_002894_090--Hb_000975_050 Hb_000521_090 Hb_000521_090 Hb_007933_030--Hb_000521_090 Hb_001195_370 Hb_001195_370 Hb_007933_030--Hb_001195_370 Hb_001080_150 Hb_001080_150 Hb_007933_030--Hb_001080_150 Hb_001793_030 Hb_001793_030 Hb_007933_030--Hb_001793_030 Hb_007933_030--Hb_000300_680 Hb_020400_020 Hb_020400_020 Hb_007933_030--Hb_020400_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.556404 1.88041 1.60982 5.41785 0.159922 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.592627 0.621023 2.17703 1.3359 14.1548

CAGE analysis