Hb_063907_010

Information

Type -
Description -
Location Contig63907: 628-789
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_063907_010 0.0 - - -
2 Hb_036693_020 0.1746867379 - - PREDICTED: transcription factor DYT1 [Jatropha curcas]
3 Hb_003050_240 0.1821808292 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000579_160 0.21365482 - - PREDICTED: uncharacterized protein LOC104216549 isoform X1 [Nicotiana sylvestris]
5 Hb_003902_080 0.2393355993 - - PREDICTED: senescence-specific cysteine protease SAG39-like [Populus euphratica]
6 Hb_011381_090 0.2503338461 - - Protein ABC1, mitochondrial precursor, putative [Ricinus communis]
7 Hb_109187_010 0.2542654107 - - PREDICTED: serine/threonine-protein kinase CDL1 [Cucumis sativus]
8 Hb_001341_140 0.263342554 - - -
9 Hb_000164_210 0.2661015133 - - glutaredoxin-1, grx1, putative [Ricinus communis]
10 Hb_005723_060 0.2689898133 - - -
11 Hb_005914_220 0.2737528637 transcription factor TF Family: Orphans conserved hypothetical protein [Ricinus communis]
12 Hb_001396_270 0.279007244 - - 4-coumarate--CoA ligase family protein [Populus trichocarpa]
13 Hb_004218_100 0.2803668469 - - PREDICTED: DNA-directed RNA polymerase V subunit 5C [Jatropha curcas]
14 Hb_000589_080 0.2845296304 - - hypothetical protein CICLE_v10032537mg [Citrus clementina]
15 Hb_001741_110 0.2898517058 rubber biosynthesis Gene Name: REF7 REF/SRPP-like protein [Glycine soja]
16 Hb_003906_040 0.2988917472 transcription factor TF Family: M-type PREDICTED: MADS-box protein SOC1-like [Tarenaya hassleriana]
17 Hb_003988_020 0.301742384 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH85-like [Populus euphratica]
18 Hb_001369_680 0.3032480593 - - PREDICTED: uncharacterized protein LOC105648582 [Jatropha curcas]
19 Hb_178343_010 0.3146810858 - - PREDICTED: two-component response regulator ARR17-like [Jatropha curcas]
20 Hb_009193_080 0.3203493012 - - -

Gene co-expression network

sample Hb_063907_010 Hb_063907_010 Hb_036693_020 Hb_036693_020 Hb_063907_010--Hb_036693_020 Hb_003050_240 Hb_003050_240 Hb_063907_010--Hb_003050_240 Hb_000579_160 Hb_000579_160 Hb_063907_010--Hb_000579_160 Hb_003902_080 Hb_003902_080 Hb_063907_010--Hb_003902_080 Hb_011381_090 Hb_011381_090 Hb_063907_010--Hb_011381_090 Hb_109187_010 Hb_109187_010 Hb_063907_010--Hb_109187_010 Hb_036693_020--Hb_003050_240 Hb_036693_020--Hb_003902_080 Hb_036693_020--Hb_000579_160 Hb_001341_140 Hb_001341_140 Hb_036693_020--Hb_001341_140 Hb_036693_020--Hb_109187_010 Hb_003050_240--Hb_000579_160 Hb_003050_240--Hb_109187_010 Hb_000589_080 Hb_000589_080 Hb_003050_240--Hb_000589_080 Hb_000164_210 Hb_000164_210 Hb_003050_240--Hb_000164_210 Hb_000579_160--Hb_109187_010 Hb_000579_160--Hb_000589_080 Hb_003906_040 Hb_003906_040 Hb_000579_160--Hb_003906_040 Hb_178343_010 Hb_178343_010 Hb_000579_160--Hb_178343_010 Hb_009193_080 Hb_009193_080 Hb_003902_080--Hb_009193_080 Hb_119960_010 Hb_119960_010 Hb_003902_080--Hb_119960_010 Hb_003902_080--Hb_003050_240 Hb_032907_010 Hb_032907_010 Hb_003902_080--Hb_032907_010 Hb_011381_090--Hb_000164_210 Hb_001195_240 Hb_001195_240 Hb_011381_090--Hb_001195_240 Hb_002820_130 Hb_002820_130 Hb_011381_090--Hb_002820_130 Hb_008536_030 Hb_008536_030 Hb_011381_090--Hb_008536_030 Hb_000237_010 Hb_000237_010 Hb_011381_090--Hb_000237_010 Hb_109187_010--Hb_000589_080 Hb_109187_010--Hb_003906_040 Hb_109187_010--Hb_178343_010 Hb_003092_010 Hb_003092_010 Hb_109187_010--Hb_003092_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
91.3504 0 0 373.995 8.80346 12.8296
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.98193 0 0 1.67509 0

CAGE analysis