Hb_064293_010

Information

Type -
Description -
Location Contig64293: 3224-4564
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID Q9SHI3
description Receptor-like protein 2 OS=Arabidopsis thaliana GN=RLP2 PE=2 SV=1
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_064293_010 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_033153_040 0.1023149345 - - o-methyltransferase, putative [Ricinus communis]
3 Hb_002849_120 0.1064970892 - - ferric reductase oxidase [Manihot esculenta]
4 Hb_000049_290 0.1105592285 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 1 [Jatropha curcas]
5 Hb_004767_020 0.1115774993 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
6 Hb_000331_220 0.1125408529 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000025_590 0.1139753507 - - PREDICTED: cytochrome P450 94A1-like isoform X1 [Jatropha curcas]
8 Hb_001836_010 0.1180125553 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Jatropha curcas]
9 Hb_002818_070 0.1181879311 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
10 Hb_000010_370 0.1229753859 - - PREDICTED: uncharacterized protein LOC105640263 [Jatropha curcas]
11 Hb_171168_010 0.1240559066 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
12 Hb_000260_480 0.1243121017 transcription factor TF Family: GRAS PREDICTED: protein SCARECROW [Jatropha curcas]
13 Hb_022487_010 0.1253475899 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
14 Hb_004324_220 0.1260585 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
15 Hb_010904_010 0.1291644037 - - PREDICTED: probable receptor-like protein kinase At5g39030 isoform X2 [Jatropha curcas]
16 Hb_000594_150 0.1293969183 - - PREDICTED: serine/threonine-protein kinase STN7, chloroplastic-like isoform X1 [Nelumbo nucifera]
17 Hb_000313_100 0.1313974992 rubber biosynthesis Gene Name: CPT4 PREDICTED: rubber cis-polyprenyltransferase HRT2 [Jatropha curcas]
18 Hb_000680_020 0.1327193961 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
19 Hb_000500_230 0.1344655491 - - hypothetical protein RCOM_0634810 [Ricinus communis]
20 Hb_004907_070 0.1347068985 - - PREDICTED: protein phosphatase 2C 37 [Jatropha curcas]

Gene co-expression network

sample Hb_064293_010 Hb_064293_010 Hb_033153_040 Hb_033153_040 Hb_064293_010--Hb_033153_040 Hb_002849_120 Hb_002849_120 Hb_064293_010--Hb_002849_120 Hb_000049_290 Hb_000049_290 Hb_064293_010--Hb_000049_290 Hb_004767_020 Hb_004767_020 Hb_064293_010--Hb_004767_020 Hb_000331_220 Hb_000331_220 Hb_064293_010--Hb_000331_220 Hb_000025_590 Hb_000025_590 Hb_064293_010--Hb_000025_590 Hb_033153_040--Hb_002849_120 Hb_005569_030 Hb_005569_030 Hb_033153_040--Hb_005569_030 Hb_000680_020 Hb_000680_020 Hb_033153_040--Hb_000680_020 Hb_003077_140 Hb_003077_140 Hb_033153_040--Hb_003077_140 Hb_000313_100 Hb_000313_100 Hb_033153_040--Hb_000313_100 Hb_001153_090 Hb_001153_090 Hb_033153_040--Hb_001153_090 Hb_002849_120--Hb_001153_090 Hb_003849_030 Hb_003849_030 Hb_002849_120--Hb_003849_030 Hb_002849_120--Hb_000680_020 Hb_001160_020 Hb_001160_020 Hb_002849_120--Hb_001160_020 Hb_127661_010 Hb_127661_010 Hb_002849_120--Hb_127661_010 Hb_022487_010 Hb_022487_010 Hb_000049_290--Hb_022487_010 Hb_004324_220 Hb_004324_220 Hb_000049_290--Hb_004324_220 Hb_000363_050 Hb_000363_050 Hb_000049_290--Hb_000363_050 Hb_000140_220 Hb_000140_220 Hb_000049_290--Hb_000140_220 Hb_000049_290--Hb_000331_220 Hb_119327_010 Hb_119327_010 Hb_004767_020--Hb_119327_010 Hb_004767_020--Hb_002849_120 Hb_171168_010 Hb_171168_010 Hb_004767_020--Hb_171168_010 Hb_007113_020 Hb_007113_020 Hb_004767_020--Hb_007113_020 Hb_004767_020--Hb_000680_020 Hb_000112_040 Hb_000112_040 Hb_000331_220--Hb_000112_040 Hb_071130_020 Hb_071130_020 Hb_000331_220--Hb_071130_020 Hb_002818_070 Hb_002818_070 Hb_000331_220--Hb_002818_070 Hb_001836_010 Hb_001836_010 Hb_000331_220--Hb_001836_010 Hb_004994_200 Hb_004994_200 Hb_000331_220--Hb_004994_200 Hb_000010_370 Hb_000010_370 Hb_000025_590--Hb_000010_370 Hb_032695_010 Hb_032695_010 Hb_000025_590--Hb_032695_010 Hb_002871_110 Hb_002871_110 Hb_000025_590--Hb_002871_110 Hb_000215_290 Hb_000215_290 Hb_000025_590--Hb_000215_290 Hb_006970_170 Hb_006970_170 Hb_000025_590--Hb_006970_170 Hb_032779_010 Hb_032779_010 Hb_000025_590--Hb_032779_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.69489 1.20222 0.692305 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0439918 0 0 0.49967 1.85462

CAGE analysis