Hb_064885_050

Information

Type -
Description -
Location Contig64885: 42430-49245
Sequence    

Annotation

kegg
ID pop:POPTR_0010s06410g
description POPTRDRAFT_658194; transferase family protein
nr
ID XP_011021361.1
description PREDICTED: BAHD acyltransferase At5g47980-like [Populus euphratica]
swissprot
ID Q9FI40
description BAHD acyltransferase At5g47980 OS=Arabidopsis thaliana GN=BAHD1 PE=2 SV=1
trembl
ID B9HTD1
description Transferase family protein OS=Populus trichocarpa GN=POPTR_0010s06410g PE=4 SV=1
Gene Ontology
ID GO:0016747
description bahd acyltransferase at5g47980-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_064885_050 0.0 - - PREDICTED: BAHD acyltransferase At5g47980-like [Populus euphratica]
2 Hb_146023_010 0.1261038472 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_000939_030 0.1287815229 - - PREDICTED: F-box protein At3g07870-like [Jatropha curcas]
4 Hb_009230_040 0.1321984264 - - conserved hypothetical protein [Ricinus communis]
5 Hb_011856_010 0.1325040941 - - cytochrome P450, putative [Ricinus communis]
6 Hb_176979_010 0.1328260818 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
7 Hb_139460_010 0.1346151889 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
8 Hb_025526_090 0.1444972887 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
9 Hb_001173_050 0.144842251 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
10 Hb_011824_010 0.1462588006 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
11 Hb_003855_070 0.1494839341 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
12 Hb_010712_020 0.149619007 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
13 Hb_002615_050 0.1497049212 - - ATP-binding cassette transporter, putative [Ricinus communis]
14 Hb_001218_020 0.1507267908 transcription factor TF Family: MYB hypothetical protein POPTR_0005s17080g [Populus trichocarpa]
15 Hb_001328_110 0.1525687089 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
16 Hb_000003_470 0.1563701007 - - conserved hypothetical protein [Ricinus communis]
17 Hb_107258_010 0.1565928802 - - hypothetical protein JCGZ_01141 [Jatropha curcas]
18 Hb_122574_020 0.15711912 - - hypothetical protein JCGZ_24076 [Jatropha curcas]
19 Hb_008705_070 0.1601275257 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
20 Hb_016172_010 0.1606123957 - - hypothetical protein JCGZ_23602 [Jatropha curcas]

Gene co-expression network

sample Hb_064885_050 Hb_064885_050 Hb_146023_010 Hb_146023_010 Hb_064885_050--Hb_146023_010 Hb_000939_030 Hb_000939_030 Hb_064885_050--Hb_000939_030 Hb_009230_040 Hb_009230_040 Hb_064885_050--Hb_009230_040 Hb_011856_010 Hb_011856_010 Hb_064885_050--Hb_011856_010 Hb_176979_010 Hb_176979_010 Hb_064885_050--Hb_176979_010 Hb_139460_010 Hb_139460_010 Hb_064885_050--Hb_139460_010 Hb_010712_020 Hb_010712_020 Hb_146023_010--Hb_010712_020 Hb_064398_010 Hb_064398_010 Hb_146023_010--Hb_064398_010 Hb_146023_010--Hb_176979_010 Hb_002917_010 Hb_002917_010 Hb_146023_010--Hb_002917_010 Hb_146023_010--Hb_000939_030 Hb_001047_250 Hb_001047_250 Hb_146023_010--Hb_001047_250 Hb_000976_020 Hb_000976_020 Hb_000939_030--Hb_000976_020 Hb_000939_030--Hb_010712_020 Hb_107258_010 Hb_107258_010 Hb_000939_030--Hb_107258_010 Hb_000140_260 Hb_000140_260 Hb_000939_030--Hb_000140_260 Hb_002110_270 Hb_002110_270 Hb_000939_030--Hb_002110_270 Hb_003581_240 Hb_003581_240 Hb_009230_040--Hb_003581_240 Hb_000813_120 Hb_000813_120 Hb_009230_040--Hb_000813_120 Hb_000118_010 Hb_000118_010 Hb_009230_040--Hb_000118_010 Hb_027288_010 Hb_027288_010 Hb_009230_040--Hb_027288_010 Hb_001173_050 Hb_001173_050 Hb_009230_040--Hb_001173_050 Hb_011856_010--Hb_139460_010 Hb_011856_010--Hb_001173_050 Hb_025526_090 Hb_025526_090 Hb_011856_010--Hb_025526_090 Hb_011824_010 Hb_011824_010 Hb_011856_010--Hb_011824_010 Hb_002615_050 Hb_002615_050 Hb_011856_010--Hb_002615_050 Hb_004185_040 Hb_004185_040 Hb_011856_010--Hb_004185_040 Hb_125644_010 Hb_125644_010 Hb_176979_010--Hb_125644_010 Hb_176979_010--Hb_002917_010 Hb_001442_080 Hb_001442_080 Hb_176979_010--Hb_001442_080 Hb_176979_010--Hb_000939_030 Hb_139460_010--Hb_011824_010 Hb_139460_010--Hb_002615_050 Hb_139460_010--Hb_001173_050 Hb_000160_230 Hb_000160_230 Hb_139460_010--Hb_000160_230 Hb_007810_140 Hb_007810_140 Hb_139460_010--Hb_007810_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0914112 0.00533804 0.0395382 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0233523 0.552803 0

CAGE analysis