Hb_064951_010

Information

Type -
Description -
Location Contig64951: 171-569
Sequence    

Annotation

kegg
ID pda:103699089
description uncharacterized LOC103699089
nr
ID XP_008779360.1
description PREDICTED: uncharacterized protein LOC103699089, partial [Phoenix dactylifera]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_064951_010 0.0 - - PREDICTED: uncharacterized protein LOC103699089, partial [Phoenix dactylifera]
2 Hb_076583_010 0.0419218656 - - hypothetical protein JCGZ_17827 [Jatropha curcas]
3 Hb_066784_020 0.117416733 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003529_210 0.1181801184 - - -
5 Hb_010997_050 0.1427845211 transcription factor TF Family: mTERF unnamed protein product [Coffea canephora]
6 Hb_089491_010 0.1723708047 - - -
7 Hb_009268_110 0.1724065824 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
8 Hb_136856_010 0.176197036 - - PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]
9 Hb_003636_050 0.1768026366 - - PREDICTED: bark storage protein A-like [Populus euphratica]
10 Hb_013727_010 0.1800748388 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
11 Hb_021068_020 0.1807028779 - - -
12 Hb_009066_010 0.1878814518 - - -
13 Hb_068347_020 0.1899292356 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
14 Hb_027394_010 0.1899380219 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
15 Hb_098842_010 0.1921899889 - - PREDICTED: uncharacterized protein At4g02000-like [Eucalyptus grandis]
16 Hb_000004_140 0.1939858798 - - -
17 Hb_005542_020 0.1977186272 - - lupus la ribonucleoprotein, putative [Ricinus communis]
18 Hb_067345_050 0.2008061047 - - PREDICTED: uncharacterized protein LOC104107076 [Nicotiana tomentosiformis]
19 Hb_105480_010 0.210083862 - - -
20 Hb_111332_010 0.2180420892 - - Dihydroneopterin aldolase [Morus notabilis]

Gene co-expression network

sample Hb_064951_010 Hb_064951_010 Hb_076583_010 Hb_076583_010 Hb_064951_010--Hb_076583_010 Hb_066784_020 Hb_066784_020 Hb_064951_010--Hb_066784_020 Hb_003529_210 Hb_003529_210 Hb_064951_010--Hb_003529_210 Hb_010997_050 Hb_010997_050 Hb_064951_010--Hb_010997_050 Hb_089491_010 Hb_089491_010 Hb_064951_010--Hb_089491_010 Hb_009268_110 Hb_009268_110 Hb_064951_010--Hb_009268_110 Hb_076583_010--Hb_010997_050 Hb_076583_010--Hb_009268_110 Hb_076583_010--Hb_089491_010 Hb_013727_010 Hb_013727_010 Hb_076583_010--Hb_013727_010 Hb_076583_010--Hb_003529_210 Hb_066784_020--Hb_003529_210 Hb_067345_050 Hb_067345_050 Hb_066784_020--Hb_067345_050 Hb_066784_020--Hb_076583_010 Hb_001899_010 Hb_001899_010 Hb_066784_020--Hb_001899_010 Hb_001135_270 Hb_001135_270 Hb_066784_020--Hb_001135_270 Hb_003529_210--Hb_001899_010 Hb_003529_210--Hb_067345_050 Hb_179763_010 Hb_179763_010 Hb_003529_210--Hb_179763_010 Hb_098842_010 Hb_098842_010 Hb_010997_050--Hb_098842_010 Hb_105484_010 Hb_105484_010 Hb_010997_050--Hb_105484_010 Hb_000004_140 Hb_000004_140 Hb_010997_050--Hb_000004_140 Hb_004282_030 Hb_004282_030 Hb_010997_050--Hb_004282_030 Hb_089491_010--Hb_009268_110 Hb_136856_010 Hb_136856_010 Hb_089491_010--Hb_136856_010 Hb_089491_010--Hb_013727_010 Hb_021068_020 Hb_021068_020 Hb_089491_010--Hb_021068_020 Hb_009066_010 Hb_009066_010 Hb_089491_010--Hb_009066_010 Hb_068347_020 Hb_068347_020 Hb_089491_010--Hb_068347_020 Hb_009268_110--Hb_136856_010 Hb_009268_110--Hb_013727_010 Hb_009268_110--Hb_021068_020 Hb_009268_110--Hb_009066_010 Hb_009268_110--Hb_068347_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.110229 0 0 0 0.489746 1.29543
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis