Hb_065059_010

Information

Type -
Description -
Location Contig65059: 9-242
Sequence    

Annotation

kegg
ID bvg:104907634
description uncharacterized LOC104907634
nr
ID XP_010694895.1
description PREDICTED: uncharacterized protein LOC104907634 [Beta vulgaris subsp. vulgaris]
swissprot
ID -
description -
trembl
ID G7LEA2
description Uncharacterized protein OS=Medicago truncatula GN=MTR_8g107770 PE=4 SV=2
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065059_010 0.0 - - PREDICTED: uncharacterized protein LOC104907634 [Beta vulgaris subsp. vulgaris]
2 Hb_000118_050 0.0002579971 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
3 Hb_008269_020 0.0003254859 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
4 Hb_084299_010 0.0009197015 - - PREDICTED: uncharacterized protein LOC104233139 [Nicotiana sylvestris]
5 Hb_002656_040 0.0011626636 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
6 Hb_000001_030 0.0013898222 - - polyprotein [Citrus endogenous pararetrovirus]
7 Hb_099586_010 0.0039098704 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
8 Hb_009813_040 0.0051771361 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
9 Hb_072825_010 0.0068038279 - - Uncharacterized protein TCM_023328 [Theobroma cacao]
10 Hb_000283_160 0.0102677028 - - hypothetical protein JCGZ_23510 [Jatropha curcas]
11 Hb_002982_060 0.011562597 - - hypothetical protein JCGZ_19604 [Jatropha curcas]
12 Hb_031104_010 0.0134719113 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
13 Hb_068578_010 0.0156113169 - - PREDICTED: uncharacterized protein LOC105789577 [Gossypium raimondii]
14 Hb_001629_070 0.0158705589 transcription factor TF Family: ULT Protein ULTRAPETALA2, putative [Ricinus communis]
15 Hb_048482_010 0.0160195605 - - -
16 Hb_104984_010 0.0207208324 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
17 Hb_000206_260 0.0216091338 - - cysteine protease, putative [Ricinus communis]
18 Hb_041626_010 0.0244228531 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
19 Hb_189099_010 0.024836301 - - PREDICTED: uncharacterized protein At1g04910-like [Citrus sinensis]
20 Hb_073373_010 0.0249988423 - - hypothetical protein JCGZ_11284 [Jatropha curcas]

Gene co-expression network

sample Hb_065059_010 Hb_065059_010 Hb_000118_050 Hb_000118_050 Hb_065059_010--Hb_000118_050 Hb_008269_020 Hb_008269_020 Hb_065059_010--Hb_008269_020 Hb_084299_010 Hb_084299_010 Hb_065059_010--Hb_084299_010 Hb_002656_040 Hb_002656_040 Hb_065059_010--Hb_002656_040 Hb_000001_030 Hb_000001_030 Hb_065059_010--Hb_000001_030 Hb_099586_010 Hb_099586_010 Hb_065059_010--Hb_099586_010 Hb_000118_050--Hb_008269_020 Hb_000118_050--Hb_084299_010 Hb_000118_050--Hb_002656_040 Hb_000118_050--Hb_000001_030 Hb_000118_050--Hb_099586_010 Hb_008269_020--Hb_084299_010 Hb_008269_020--Hb_002656_040 Hb_008269_020--Hb_000001_030 Hb_008269_020--Hb_099586_010 Hb_084299_010--Hb_002656_040 Hb_084299_010--Hb_000001_030 Hb_084299_010--Hb_099586_010 Hb_002656_040--Hb_000001_030 Hb_002656_040--Hb_099586_010 Hb_000001_030--Hb_099586_010 Hb_009813_040 Hb_009813_040 Hb_099586_010--Hb_009813_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.413279 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.6031

CAGE analysis