Hb_065133_010

Information

Type -
Description -
Location Contig65133: 552-3580
Sequence    

Annotation

kegg
ID vvi:100245876
description receptor-like protein 12
nr
ID XP_003633343.1
description PREDICTED: receptor-like protein 12 [Vitis vinifera]
swissprot
ID Q9C9H7
description Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2
trembl
ID F6HHM3
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0057g00620 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065133_010 0.0 - - PREDICTED: receptor-like protein 12 [Vitis vinifera]
2 Hb_001294_040 0.1791769664 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
3 Hb_004411_050 0.1817915817 - - quinone oxidoreductase-like protein [Arabidopsis thaliana]
4 Hb_001158_120 0.2046806775 - - PREDICTED: uncharacterized protein LOC105648761 isoform X1 [Jatropha curcas]
5 Hb_005016_080 0.2053748876 - - PREDICTED: neurofilament heavy polypeptide-like [Jatropha curcas]
6 Hb_002361_010 0.2061910296 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
7 Hb_000809_140 0.2078447981 - - hypothetical protein JCGZ_12354 [Jatropha curcas]
8 Hb_001918_030 0.2082700236 - - -
9 Hb_003125_080 0.2105465864 - - PREDICTED: F-box protein At5g50450 [Jatropha curcas]
10 Hb_000041_260 0.210886488 - - PREDICTED: reticulocalbin-2 [Jatropha curcas]
11 Hb_011381_070 0.2111162493 transcription factor TF Family: DBB PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Jatropha curcas]
12 Hb_000689_010 0.2117731119 desease resistance Gene Name: LRR_8 PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
13 Hb_002095_050 0.2120515779 - - PREDICTED: uncharacterized protein LOC104447479 [Eucalyptus grandis]
14 Hb_014361_170 0.21224814 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 37 [Jatropha curcas]
15 Hb_015531_010 0.212396291 - - PREDICTED: uncharacterized protein LOC105636764 [Jatropha curcas]
16 Hb_000035_490 0.2128535578 transcription factor TF Family: DBB PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Jatropha curcas]
17 Hb_094439_010 0.2153725725 - - PREDICTED: MACPF domain-containing protein At1g14780 [Jatropha curcas]
18 Hb_010683_060 0.2199917801 - - hypothetical protein CISIN_1g046469mg, partial [Citrus sinensis]
19 Hb_004306_130 0.2212747234 - - PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]
20 Hb_031685_010 0.221284775 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_065133_010 Hb_065133_010 Hb_001294_040 Hb_001294_040 Hb_065133_010--Hb_001294_040 Hb_004411_050 Hb_004411_050 Hb_065133_010--Hb_004411_050 Hb_001158_120 Hb_001158_120 Hb_065133_010--Hb_001158_120 Hb_005016_080 Hb_005016_080 Hb_065133_010--Hb_005016_080 Hb_002361_010 Hb_002361_010 Hb_065133_010--Hb_002361_010 Hb_000809_140 Hb_000809_140 Hb_065133_010--Hb_000809_140 Hb_001294_040--Hb_001158_120 Hb_011381_070 Hb_011381_070 Hb_001294_040--Hb_011381_070 Hb_014361_170 Hb_014361_170 Hb_001294_040--Hb_014361_170 Hb_000366_050 Hb_000366_050 Hb_001294_040--Hb_000366_050 Hb_000008_430 Hb_000008_430 Hb_001294_040--Hb_000008_430 Hb_000035_490 Hb_000035_490 Hb_001294_040--Hb_000035_490 Hb_005486_020 Hb_005486_020 Hb_004411_050--Hb_005486_020 Hb_000990_040 Hb_000990_040 Hb_004411_050--Hb_000990_040 Hb_003777_120 Hb_003777_120 Hb_004411_050--Hb_003777_120 Hb_006789_030 Hb_006789_030 Hb_004411_050--Hb_006789_030 Hb_029095_010 Hb_029095_010 Hb_004411_050--Hb_029095_010 Hb_002596_090 Hb_002596_090 Hb_004411_050--Hb_002596_090 Hb_001158_120--Hb_011381_070 Hb_001158_120--Hb_000366_050 Hb_002609_290 Hb_002609_290 Hb_001158_120--Hb_002609_290 Hb_005539_100 Hb_005539_100 Hb_001158_120--Hb_005539_100 Hb_007483_080 Hb_007483_080 Hb_001158_120--Hb_007483_080 Hb_002010_100 Hb_002010_100 Hb_005016_080--Hb_002010_100 Hb_005016_080--Hb_002361_010 Hb_005463_070 Hb_005463_070 Hb_005016_080--Hb_005463_070 Hb_000318_050 Hb_000318_050 Hb_005016_080--Hb_000318_050 Hb_003387_080 Hb_003387_080 Hb_005016_080--Hb_003387_080 Hb_001160_020 Hb_001160_020 Hb_005016_080--Hb_001160_020 Hb_002361_010--Hb_002010_100 Hb_002361_010--Hb_007483_080 Hb_002361_010--Hb_005463_070 Hb_002361_010--Hb_000318_050 Hb_018212_010 Hb_018212_010 Hb_002361_010--Hb_018212_010 Hb_001386_100 Hb_001386_100 Hb_000809_140--Hb_001386_100 Hb_001235_160 Hb_001235_160 Hb_000809_140--Hb_001235_160 Hb_095471_020 Hb_095471_020 Hb_000809_140--Hb_095471_020 Hb_000308_010 Hb_000308_010 Hb_000809_140--Hb_000308_010 Hb_065755_020 Hb_065755_020 Hb_000809_140--Hb_065755_020 Hb_000809_140--Hb_001294_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0101771 0.260604 0.54261 0.08337 0.0795417 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0182015 0 0.166587 0.230645

CAGE analysis