Hb_065395_020

Information

Type -
Description -
Location Contig65395: 7754-15448
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID XP_002517677.1
description receptor-kinase, putative [Ricinus communis]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID B9RVA8
description Receptor-kinase, putative OS=Ricinus communis GN=RCOM_0901450 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065395_020 0.0 - - receptor-kinase, putative [Ricinus communis]
2 Hb_004981_010 0.1570860251 - - -
3 Hb_004235_020 0.174089465 - - PREDICTED: uncharacterized protein LOC103322555 [Prunus mume]
4 Hb_143398_020 0.192425615 - - PREDICTED: 21 kDa protein [Populus euphratica]
5 Hb_009888_010 0.2167442263 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_003717_020 0.2249474109 - - -
7 Hb_004678_070 0.2480414458 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
8 Hb_008680_010 0.2635780992 - - -
9 Hb_032717_090 0.2708833865 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001899_020 0.2709567638 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 [Jatropha curcas]
11 Hb_098068_010 0.2709597971 - - PREDICTED: putative phospholipid-transporting ATPase 8 [Jatropha curcas]
12 Hb_000204_170 0.2817910427 - - integrase [Gossypium herbaceum]
13 Hb_005472_010 0.2817952282 - - -
14 Hb_005986_020 0.2817971034 - - putative polyprotein [Oryza sativa Japonica Group]
15 Hb_115505_010 0.2818002506 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
16 Hb_008898_010 0.2818097023 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
17 Hb_003239_030 0.2818182675 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
18 Hb_099058_020 0.2818386586 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
19 Hb_014115_020 0.2818566017 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
20 Hb_016671_020 0.2818634572 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_065395_020 Hb_065395_020 Hb_004981_010 Hb_004981_010 Hb_065395_020--Hb_004981_010 Hb_004235_020 Hb_004235_020 Hb_065395_020--Hb_004235_020 Hb_143398_020 Hb_143398_020 Hb_065395_020--Hb_143398_020 Hb_009888_010 Hb_009888_010 Hb_065395_020--Hb_009888_010 Hb_003717_020 Hb_003717_020 Hb_065395_020--Hb_003717_020 Hb_004678_070 Hb_004678_070 Hb_065395_020--Hb_004678_070 Hb_004981_010--Hb_003717_020 Hb_001021_050 Hb_001021_050 Hb_004981_010--Hb_001021_050 Hb_001758_030 Hb_001758_030 Hb_004981_010--Hb_001758_030 Hb_181402_010 Hb_181402_010 Hb_004981_010--Hb_181402_010 Hb_000045_060 Hb_000045_060 Hb_004981_010--Hb_000045_060 Hb_004235_020--Hb_009888_010 Hb_004235_020--Hb_143398_020 Hb_032717_090 Hb_032717_090 Hb_004235_020--Hb_032717_090 Hb_008680_010 Hb_008680_010 Hb_004235_020--Hb_008680_010 Hb_004445_030 Hb_004445_030 Hb_004235_020--Hb_004445_030 Hb_143398_020--Hb_009888_010 Hb_143398_020--Hb_001021_050 Hb_143398_020--Hb_032717_090 Hb_123951_010 Hb_123951_010 Hb_143398_020--Hb_123951_010 Hb_005352_010 Hb_005352_010 Hb_009888_010--Hb_005352_010 Hb_027522_020 Hb_027522_020 Hb_009888_010--Hb_027522_020 Hb_009888_010--Hb_123951_010 Hb_022599_010 Hb_022599_010 Hb_009888_010--Hb_022599_010 Hb_003717_020--Hb_181402_010 Hb_003717_020--Hb_001021_050 Hb_003717_020--Hb_000045_060 Hb_111985_030 Hb_111985_030 Hb_003717_020--Hb_111985_030 Hb_097981_010 Hb_097981_010 Hb_004678_070--Hb_097981_010 Hb_004678_070--Hb_001758_030 Hb_003540_070 Hb_003540_070 Hb_004678_070--Hb_003540_070 Hb_004678_070--Hb_004981_010 Hb_002471_280 Hb_002471_280 Hb_004678_070--Hb_002471_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00657158 0 0 0 0.00697135
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0302599

CAGE analysis