Hb_065452_010

Information

Type -
Description -
Location Contig65452: 2404-2637
Sequence    

Annotation

kegg
ID rcu:RCOM_0138530
description hypothetical protein
nr
ID XP_002526161.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID F4I037
description Protein trichome berefringence-like 7 OS=Arabidopsis thaliana GN=TBL7 PE=3 SV=1
trembl
ID B9SJJ2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0138530 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065452_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001882_150 0.2436051262 transcription factor TF Family: mTERF -
3 Hb_011344_100 0.2555554043 - - -
4 Hb_115445_010 0.2692430328 - - -
5 Hb_002217_490 0.2722498898 - - -
6 Hb_030694_010 0.2748392318 - - PREDICTED: endoglucanase 25-like [Solanum tuberosum]
7 Hb_005675_060 0.2750504957 - - PREDICTED: protein NIM1-INTERACTING 2 [Jatropha curcas]
8 Hb_002217_040 0.2752245102 - - PREDICTED: boron transporter 1-like [Jatropha curcas]
9 Hb_170516_010 0.2801443748 - - hypothetical protein MTR_001s0023 [Medicago truncatula]
10 Hb_006907_050 0.2807877538 - - unnamed protein product [Coffea canephora]
11 Hb_001907_130 0.2820368668 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
12 Hb_000007_380 0.2837258101 - - Disease resistance family protein / LRR family protein, putative [Theobroma cacao]
13 Hb_002805_100 0.2883227263 - - Receptor-like protein 12 [Morus notabilis]
14 Hb_005618_130 0.2883335724 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
15 Hb_008026_010 0.2908513584 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 9 [Jatropha curcas]
16 Hb_115116_010 0.2919104197 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
17 Hb_003674_020 0.2939547404 - - PREDICTED: DNA replication licensing factor MCM6 [Jatropha curcas]
18 Hb_010775_020 0.2953001804 transcription factor TF Family: ERF Floral homeotic protein APETALA2, putative [Ricinus communis]
19 Hb_000080_080 0.2961669534 - - -
20 Hb_018691_010 0.3002920829 - - -

Gene co-expression network

sample Hb_065452_010 Hb_065452_010 Hb_001882_150 Hb_001882_150 Hb_065452_010--Hb_001882_150 Hb_011344_100 Hb_011344_100 Hb_065452_010--Hb_011344_100 Hb_115445_010 Hb_115445_010 Hb_065452_010--Hb_115445_010 Hb_002217_490 Hb_002217_490 Hb_065452_010--Hb_002217_490 Hb_030694_010 Hb_030694_010 Hb_065452_010--Hb_030694_010 Hb_005675_060 Hb_005675_060 Hb_065452_010--Hb_005675_060 Hb_148346_010 Hb_148346_010 Hb_001882_150--Hb_148346_010 Hb_002539_050 Hb_002539_050 Hb_001882_150--Hb_002539_050 Hb_083493_010 Hb_083493_010 Hb_001882_150--Hb_083493_010 Hb_000164_150 Hb_000164_150 Hb_001882_150--Hb_000164_150 Hb_000003_740 Hb_000003_740 Hb_001882_150--Hb_000003_740 Hb_005694_180 Hb_005694_180 Hb_001882_150--Hb_005694_180 Hb_001907_130 Hb_001907_130 Hb_011344_100--Hb_001907_130 Hb_170516_010 Hb_170516_010 Hb_011344_100--Hb_170516_010 Hb_115116_010 Hb_115116_010 Hb_011344_100--Hb_115116_010 Hb_033594_090 Hb_033594_090 Hb_011344_100--Hb_033594_090 Hb_005464_010 Hb_005464_010 Hb_011344_100--Hb_005464_010 Hb_003712_010 Hb_003712_010 Hb_115445_010--Hb_003712_010 Hb_000635_190 Hb_000635_190 Hb_115445_010--Hb_000635_190 Hb_096878_010 Hb_096878_010 Hb_115445_010--Hb_096878_010 Hb_006721_060 Hb_006721_060 Hb_115445_010--Hb_006721_060 Hb_071433_010 Hb_071433_010 Hb_115445_010--Hb_071433_010 Hb_185830_090 Hb_185830_090 Hb_115445_010--Hb_185830_090 Hb_000080_080 Hb_000080_080 Hb_002217_490--Hb_000080_080 Hb_005672_030 Hb_005672_030 Hb_002217_490--Hb_005672_030 Hb_123926_010 Hb_123926_010 Hb_002217_490--Hb_123926_010 Hb_034280_010 Hb_034280_010 Hb_002217_490--Hb_034280_010 Hb_001369_140 Hb_001369_140 Hb_002217_490--Hb_001369_140 Hb_000676_130 Hb_000676_130 Hb_002217_490--Hb_000676_130 Hb_001478_070 Hb_001478_070 Hb_030694_010--Hb_001478_070 Hb_000803_120 Hb_000803_120 Hb_030694_010--Hb_000803_120 Hb_002093_050 Hb_002093_050 Hb_030694_010--Hb_002093_050 Hb_153257_010 Hb_153257_010 Hb_030694_010--Hb_153257_010 Hb_000078_160 Hb_000078_160 Hb_030694_010--Hb_000078_160 Hb_003050_100 Hb_003050_100 Hb_030694_010--Hb_003050_100 Hb_000803_310 Hb_000803_310 Hb_005675_060--Hb_000803_310 Hb_004945_020 Hb_004945_020 Hb_005675_060--Hb_004945_020 Hb_005675_060--Hb_001907_130 Hb_027472_130 Hb_027472_130 Hb_005675_060--Hb_027472_130 Hb_000401_010 Hb_000401_010 Hb_005675_060--Hb_000401_010 Hb_131864_030 Hb_131864_030 Hb_005675_060--Hb_131864_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.51895 1.21889 2.08403 0.707593 0.39063
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.17082 0

CAGE analysis