Hb_065642_010

Information

Type -
Description -
Location Contig65642: 5-634
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065642_010 0.0 - - -
2 Hb_000046_020 0.2031358509 - - -
3 Hb_002843_190 0.2210112362 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 7 isoform X1 [Jatropha curcas]
4 Hb_007044_210 0.2228346736 transcription factor TF Family: MYB PREDICTED: protein rough sheath 2 homolog [Populus euphratica]
5 Hb_003018_110 0.2277319189 - - -
6 Hb_028365_010 0.2387623984 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
7 Hb_000373_290 0.244144984 - - RecName: Full=Citrate-binding protein; Flags: Precursor [Hevea brasiliensis]
8 Hb_005410_030 0.2509017012 - - glutaredoxin 2 [Hevea brasiliensis]
9 Hb_010128_110 0.2511730573 - - PREDICTED: uncharacterized protein LOC105632071 [Jatropha curcas]
10 Hb_000221_100 0.252013533 - - hypothetical protein POPTR_0006s07000g [Populus trichocarpa]
11 Hb_007849_030 0.2522265588 - - l-allo-threonine aldolase, putative [Ricinus communis]
12 Hb_145761_010 0.2553116549 - - -
13 Hb_002918_280 0.256750979 - - hypothetical protein POPTR_0004s04800g [Populus trichocarpa]
14 Hb_042404_010 0.2571648676 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1-like [Jatropha curcas]
15 Hb_000445_330 0.2615084374 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000959_360 0.2642199294 - - transporter, putative [Ricinus communis]
17 Hb_001980_020 0.2654485643 - - -
18 Hb_001143_010 0.2663150366 - - -
19 Hb_007625_020 0.2669349166 - - PREDICTED: casein kinase II subunit alpha-like [Sesamum indicum]
20 Hb_000680_150 0.270093443 - - PREDICTED: protein STU1-like [Jatropha curcas]

Gene co-expression network

sample Hb_065642_010 Hb_065642_010 Hb_000046_020 Hb_000046_020 Hb_065642_010--Hb_000046_020 Hb_002843_190 Hb_002843_190 Hb_065642_010--Hb_002843_190 Hb_007044_210 Hb_007044_210 Hb_065642_010--Hb_007044_210 Hb_003018_110 Hb_003018_110 Hb_065642_010--Hb_003018_110 Hb_028365_010 Hb_028365_010 Hb_065642_010--Hb_028365_010 Hb_000373_290 Hb_000373_290 Hb_065642_010--Hb_000373_290 Hb_000221_100 Hb_000221_100 Hb_000046_020--Hb_000221_100 Hb_145761_010 Hb_145761_010 Hb_000046_020--Hb_145761_010 Hb_002742_010 Hb_002742_010 Hb_000046_020--Hb_002742_010 Hb_001741_050 Hb_001741_050 Hb_000046_020--Hb_001741_050 Hb_086859_010 Hb_086859_010 Hb_000046_020--Hb_086859_010 Hb_002843_190--Hb_028365_010 Hb_027751_040 Hb_027751_040 Hb_002843_190--Hb_027751_040 Hb_027751_030 Hb_027751_030 Hb_002843_190--Hb_027751_030 Hb_010128_110 Hb_010128_110 Hb_002843_190--Hb_010128_110 Hb_003992_120 Hb_003992_120 Hb_002843_190--Hb_003992_120 Hb_001980_020 Hb_001980_020 Hb_002843_190--Hb_001980_020 Hb_004724_140 Hb_004724_140 Hb_007044_210--Hb_004724_140 Hb_000548_030 Hb_000548_030 Hb_007044_210--Hb_000548_030 Hb_001386_130 Hb_001386_130 Hb_007044_210--Hb_001386_130 Hb_007044_210--Hb_000373_290 Hb_000481_020 Hb_000481_020 Hb_007044_210--Hb_000481_020 Hb_002681_040 Hb_002681_040 Hb_007044_210--Hb_002681_040 Hb_005545_030 Hb_005545_030 Hb_003018_110--Hb_005545_030 Hb_003018_110--Hb_002681_040 Hb_000680_150 Hb_000680_150 Hb_003018_110--Hb_000680_150 Hb_073973_170 Hb_073973_170 Hb_003018_110--Hb_073973_170 Hb_004046_040 Hb_004046_040 Hb_003018_110--Hb_004046_040 Hb_002918_280 Hb_002918_280 Hb_003018_110--Hb_002918_280 Hb_003023_050 Hb_003023_050 Hb_028365_010--Hb_003023_050 Hb_012779_110 Hb_012779_110 Hb_028365_010--Hb_012779_110 Hb_005410_030 Hb_005410_030 Hb_028365_010--Hb_005410_030 Hb_001109_120 Hb_001109_120 Hb_028365_010--Hb_001109_120 Hb_002221_080 Hb_002221_080 Hb_028365_010--Hb_002221_080 Hb_000920_140 Hb_000920_140 Hb_000373_290--Hb_000920_140 Hb_001195_580 Hb_001195_580 Hb_000373_290--Hb_001195_580 Hb_023988_020 Hb_023988_020 Hb_000373_290--Hb_023988_020 Hb_000641_030 Hb_000641_030 Hb_000373_290--Hb_000641_030 Hb_005271_170 Hb_005271_170 Hb_000373_290--Hb_005271_170 Hb_019516_040 Hb_019516_040 Hb_000373_290--Hb_019516_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.56996 0.433113 0 0.847628 1.58159 1.10855
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.53095 4.10969 0 0.0426495 0

CAGE analysis