Hb_065841_010

Information

Type -
Description -
Location Contig65841: 204-927
Sequence    

Annotation

kegg
ID osa:4339529
description Os05g0550800
nr
ID KDP29455.1
description hypothetical protein JCGZ_18376 [Jatropha curcas]
swissprot
ID O43283
description Mitogen-activated protein kinase kinase kinase 13 OS=Homo sapiens GN=MAP3K13 PE=1 SV=1
trembl
ID A0A067KB15
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18376 PE=4 SV=1
Gene Ontology
ID GO:0000166
description probable serine threonine-protein kinase at1g18390 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065841_010 0.0 - - hypothetical protein JCGZ_18376 [Jatropha curcas]
2 Hb_007157_060 0.1353418458 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
3 Hb_013358_100 0.1648101229 - - unknown [Medicago truncatula]
4 Hb_008054_050 0.1654384062 - - PREDICTED: uncharacterized protein LOC101212042 [Cucumis sativus]
5 Hb_068569_010 0.1679168438 - - -
6 Hb_161994_040 0.1753560497 - - -
7 Hb_177152_010 0.1765645154 - - glycosyl hydrolase family 38 family protein [Populus trichocarpa]
8 Hb_000311_030 0.1828319273 - - hypothetical protein B456_002G227600 [Gossypium raimondii]
9 Hb_007749_010 0.1909584471 - - -
10 Hb_002235_270 0.1912241357 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100 [Jatropha curcas]
11 Hb_145317_010 0.1926047948 - - PREDICTED: transmembrane 9 superfamily member 11 [Jatropha curcas]
12 Hb_006483_030 0.193873052 - - Cucumisin precursor, putative [Ricinus communis]
13 Hb_000438_150 0.2166071245 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 7 [Jatropha curcas]
14 Hb_169329_010 0.2210904419 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X2 [Jatropha curcas]
15 Hb_054885_010 0.2235464852 - - -
16 Hb_004935_080 0.2252454697 - - AT3g13060/MGH6_17 [Arabidopsis thaliana]
17 Hb_000258_360 0.2252856738 - - PREDICTED: uncharacterized protein LOC104455487 [Eucalyptus grandis]
18 Hb_002498_050 0.2304758052 - - PREDICTED: aspartic proteinase-like [Jatropha curcas]
19 Hb_059641_010 0.2352507441 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
20 Hb_000086_100 0.2376249819 - - hypothetical protein POPTR_0005s24730g [Populus trichocarpa]

Gene co-expression network

sample Hb_065841_010 Hb_065841_010 Hb_007157_060 Hb_007157_060 Hb_065841_010--Hb_007157_060 Hb_013358_100 Hb_013358_100 Hb_065841_010--Hb_013358_100 Hb_008054_050 Hb_008054_050 Hb_065841_010--Hb_008054_050 Hb_068569_010 Hb_068569_010 Hb_065841_010--Hb_068569_010 Hb_161994_040 Hb_161994_040 Hb_065841_010--Hb_161994_040 Hb_177152_010 Hb_177152_010 Hb_065841_010--Hb_177152_010 Hb_006483_030 Hb_006483_030 Hb_007157_060--Hb_006483_030 Hb_007749_010 Hb_007749_010 Hb_007157_060--Hb_007749_010 Hb_145317_010 Hb_145317_010 Hb_007157_060--Hb_145317_010 Hb_000181_290 Hb_000181_290 Hb_007157_060--Hb_000181_290 Hb_000818_100 Hb_000818_100 Hb_007157_060--Hb_000818_100 Hb_013358_100--Hb_177152_010 Hb_013358_100--Hb_068569_010 Hb_040747_010 Hb_040747_010 Hb_013358_100--Hb_040747_010 Hb_035436_010 Hb_035436_010 Hb_013358_100--Hb_035436_010 Hb_004935_080 Hb_004935_080 Hb_013358_100--Hb_004935_080 Hb_008054_050--Hb_145317_010 Hb_004374_130 Hb_004374_130 Hb_008054_050--Hb_004374_130 Hb_008054_050--Hb_161994_040 Hb_000311_030 Hb_000311_030 Hb_008054_050--Hb_000311_030 Hb_002498_050 Hb_002498_050 Hb_008054_050--Hb_002498_050 Hb_001217_040 Hb_001217_040 Hb_008054_050--Hb_001217_040 Hb_010964_020 Hb_010964_020 Hb_068569_010--Hb_010964_020 Hb_178620_010 Hb_178620_010 Hb_068569_010--Hb_178620_010 Hb_000053_030 Hb_000053_030 Hb_068569_010--Hb_000053_030 Hb_033385_010 Hb_033385_010 Hb_068569_010--Hb_033385_010 Hb_161994_040--Hb_000311_030 Hb_161994_040--Hb_013358_100 Hb_161994_040--Hb_145317_010 Hb_006642_030 Hb_006642_030 Hb_161994_040--Hb_006642_030 Hb_177152_010--Hb_145317_010 Hb_169329_010 Hb_169329_010 Hb_177152_010--Hb_169329_010 Hb_177152_010--Hb_035436_010 Hb_177152_010--Hb_178620_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
69.3812 51.0873 17.1709 145.111 36.898 62.1277
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.27501 3.36592 4.83566 18.4291 4.81828

CAGE analysis