Hb_065943_010

Information

Type -
Description -
Location Contig65943: 1991-2939
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_065943_010 0.0 - - -
2 Hb_006157_050 0.0118501379 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
3 Hb_099723_010 0.0195256985 - - hypothetical protein JCGZ_15340 [Jatropha curcas]
4 Hb_000940_190 0.0245729737 - - PREDICTED: uncharacterized protein LOC104878039 [Vitis vinifera]
5 Hb_032531_010 0.0840355844 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_050334_010 0.1086248089 - - -
7 Hb_002869_070 0.1322328697 - - -
8 Hb_106815_010 0.1777726884 - - hypothetical protein, conserved [Eimeria acervulina]
9 Hb_004212_040 0.1793356348 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
10 Hb_002473_140 0.1854292525 - - -
11 Hb_001519_210 0.1948240176 - - hypothetical protein B456_003G032500 [Gossypium raimondii]
12 Hb_012295_020 0.2077504655 - - PREDICTED: uncharacterized protein LOC104223093 [Nicotiana sylvestris]
13 Hb_000205_340 0.2121447763 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
14 Hb_012071_010 0.2164906178 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
15 Hb_004124_010 0.2193622502 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
16 Hb_181107_010 0.224025083 - - hypothetical protein, partial [Pseudomonas tolaasii]
17 Hb_001168_090 0.224025139 - - PREDICTED: uncharacterized protein LOC104246050 [Nicotiana sylvestris]
18 Hb_000029_430 0.2240253984 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic-like [Jatropha curcas]
19 Hb_009577_010 0.2240254259 - - -
20 Hb_026405_010 0.2240255107 - - PREDICTED: uncharacterized protein LOC104107896 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_065943_010 Hb_065943_010 Hb_006157_050 Hb_006157_050 Hb_065943_010--Hb_006157_050 Hb_099723_010 Hb_099723_010 Hb_065943_010--Hb_099723_010 Hb_000940_190 Hb_000940_190 Hb_065943_010--Hb_000940_190 Hb_032531_010 Hb_032531_010 Hb_065943_010--Hb_032531_010 Hb_050334_010 Hb_050334_010 Hb_065943_010--Hb_050334_010 Hb_002869_070 Hb_002869_070 Hb_065943_010--Hb_002869_070 Hb_006157_050--Hb_099723_010 Hb_006157_050--Hb_000940_190 Hb_006157_050--Hb_032531_010 Hb_006157_050--Hb_050334_010 Hb_006157_050--Hb_002869_070 Hb_099723_010--Hb_000940_190 Hb_099723_010--Hb_032531_010 Hb_099723_010--Hb_050334_010 Hb_099723_010--Hb_002869_070 Hb_000940_190--Hb_032531_010 Hb_000940_190--Hb_050334_010 Hb_000940_190--Hb_002869_070 Hb_032531_010--Hb_050334_010 Hb_012295_020 Hb_012295_020 Hb_032531_010--Hb_012295_020 Hb_001519_210 Hb_001519_210 Hb_050334_010--Hb_001519_210 Hb_050334_010--Hb_002869_070 Hb_006933_010 Hb_006933_010 Hb_002869_070--Hb_006933_010 Hb_154997_010 Hb_154997_010 Hb_002869_070--Hb_154997_010 Hb_004124_010 Hb_004124_010 Hb_002869_070--Hb_004124_010 Hb_002473_140 Hb_002473_140 Hb_002869_070--Hb_002473_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.105595 0.0238732 0.117105

CAGE analysis