Hb_066182_010

Information

Type -
Description -
Location Contig66182: 1-750
Sequence    

Annotation

kegg
ID rcu:RCOM_0571360
description receptor for activated protein kinase C, putative (EC:2.7.11.7)
nr
ID XP_012072542.1
description PREDICTED: guanine nucleotide-binding protein subunit beta-like protein [Jatropha curcas]
swissprot
ID Q39836
description Guanine nucleotide-binding protein subunit beta-like protein OS=Glycine max PE=2 SV=1
trembl
ID A0A067KNU7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05340 PE=4 SV=1
Gene Ontology
ID GO:0005515
description guanine nucleotide-binding protein subunit beta-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53072: 674-983
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_066182_010 0.0 - - PREDICTED: guanine nucleotide-binding protein subunit beta-like protein [Jatropha curcas]
2 Hb_054865_100 0.0548895107 - - PREDICTED: probable protein S-acyltransferase 12 isoform X1 [Jatropha curcas]
3 Hb_000300_060 0.0549734397 - - PREDICTED: F-box protein SKIP24 [Jatropha curcas]
4 Hb_005276_210 0.059381033 - - PREDICTED: DNA repair helicase UVH6 isoform X2 [Jatropha curcas]
5 Hb_002081_130 0.0628737946 - - serine carboxypeptidase, putative [Ricinus communis]
6 Hb_002149_020 0.0637015094 - - PREDICTED: uncharacterized protein LOC105647982 isoform X2 [Jatropha curcas]
7 Hb_000640_240 0.0663469432 - - carboxypeptidase regulatory region-containingprotein, putative [Ricinus communis]
8 Hb_001571_040 0.0685235343 - - PREDICTED: uncharacterized protein LOC105643972 [Jatropha curcas]
9 Hb_000327_120 0.0693054084 - - FGFR1 oncogene partner, putative [Ricinus communis]
10 Hb_000853_170 0.0714068927 - - PREDICTED: programmed cell death protein 2 isoform X3 [Populus euphratica]
11 Hb_015746_010 0.0727101657 - - PREDICTED: triacylglycerol lipase 2-like [Jatropha curcas]
12 Hb_006827_020 0.073001073 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000538_100 0.0743596261 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001790_020 0.0748257425 - - PREDICTED: uncharacterized protein LOC105642165 [Jatropha curcas]
15 Hb_007218_080 0.0761353978 - - PREDICTED: uncharacterized protein LOC105631523 [Jatropha curcas]
16 Hb_005245_130 0.0764478234 - - PREDICTED: uncharacterized protein LOC105643730 [Jatropha curcas]
17 Hb_002043_190 0.0767061957 - - rwd domain-containing protein, putative [Ricinus communis]
18 Hb_000085_160 0.0782129779 - - hypothetical protein CICLE_v10009012mg [Citrus clementina]
19 Hb_003952_070 0.0784251437 - - ubiquitin-protein ligase, putative [Ricinus communis]
20 Hb_003025_020 0.0785245924 - - WD-repeat protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_066182_010 Hb_066182_010 Hb_054865_100 Hb_054865_100 Hb_066182_010--Hb_054865_100 Hb_000300_060 Hb_000300_060 Hb_066182_010--Hb_000300_060 Hb_005276_210 Hb_005276_210 Hb_066182_010--Hb_005276_210 Hb_002081_130 Hb_002081_130 Hb_066182_010--Hb_002081_130 Hb_002149_020 Hb_002149_020 Hb_066182_010--Hb_002149_020 Hb_000640_240 Hb_000640_240 Hb_066182_010--Hb_000640_240 Hb_054865_100--Hb_005276_210 Hb_006620_020 Hb_006620_020 Hb_054865_100--Hb_006620_020 Hb_000327_120 Hb_000327_120 Hb_054865_100--Hb_000327_120 Hb_000174_110 Hb_000174_110 Hb_054865_100--Hb_000174_110 Hb_000645_050 Hb_000645_050 Hb_054865_100--Hb_000645_050 Hb_000300_060--Hb_005276_210 Hb_003097_150 Hb_003097_150 Hb_000300_060--Hb_003097_150 Hb_001571_040 Hb_001571_040 Hb_000300_060--Hb_001571_040 Hb_000300_060--Hb_002081_130 Hb_003010_030 Hb_003010_030 Hb_000300_060--Hb_003010_030 Hb_000034_100 Hb_000034_100 Hb_005276_210--Hb_000034_100 Hb_002477_280 Hb_002477_280 Hb_005276_210--Hb_002477_280 Hb_003952_070 Hb_003952_070 Hb_005276_210--Hb_003952_070 Hb_002043_190 Hb_002043_190 Hb_002081_130--Hb_002043_190 Hb_003025_020 Hb_003025_020 Hb_002081_130--Hb_003025_020 Hb_005993_040 Hb_005993_040 Hb_002081_130--Hb_005993_040 Hb_002391_300 Hb_002391_300 Hb_002081_130--Hb_002391_300 Hb_002609_110 Hb_002609_110 Hb_002149_020--Hb_002609_110 Hb_004440_090 Hb_004440_090 Hb_002149_020--Hb_004440_090 Hb_002149_020--Hb_002391_300 Hb_002149_020--Hb_000300_060 Hb_003005_020 Hb_003005_020 Hb_002149_020--Hb_003005_020 Hb_001358_030 Hb_001358_030 Hb_000640_240--Hb_001358_030 Hb_003126_050 Hb_003126_050 Hb_000640_240--Hb_003126_050 Hb_096563_010 Hb_096563_010 Hb_000640_240--Hb_096563_010 Hb_011970_030 Hb_011970_030 Hb_000640_240--Hb_011970_030 Hb_003417_020 Hb_003417_020 Hb_000640_240--Hb_003417_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
353.546 181.729 147.445 172.172 471.747 372.064
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
326.22 325.738 228.816 236.312 104.282

CAGE analysis