Hb_066807_010

Information

Type -
Description -
Location Contig66807: 700-1596
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa015950mg
description hypothetical protein
nr
ID XP_012065208.1
description PREDICTED: uncharacterized protein LOC105628412 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID M5XL58
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015950mg PE=4 SV=1
Gene Ontology
ID GO:0005794
description probable beta- -galactosyltransferase 16

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_066807_010 0.0 - - PREDICTED: uncharacterized protein LOC105628412 [Jatropha curcas]
2 Hb_026048_100 0.0824035058 - - PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
3 Hb_002681_140 0.0860221431 - - PREDICTED: surfeit locus protein 2 [Jatropha curcas]
4 Hb_004852_030 0.0911918311 - - PREDICTED: uncharacterized protein LOC105639923 [Jatropha curcas]
5 Hb_032531_030 0.0986106257 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
6 Hb_000365_360 0.0991015807 - - PREDICTED: RING finger and transmembrane domain-containing protein 2 isoform X1 [Jatropha curcas]
7 Hb_001902_050 0.1023632521 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105648450 [Jatropha curcas]
8 Hb_005735_030 0.1065419744 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002007_270 0.1067680162 - - PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g05340-like [Jatropha curcas]
10 Hb_098709_010 0.1068053345 - - PREDICTED: protein argonaute 1 [Jatropha curcas]
11 Hb_001014_220 0.1071362932 - - PREDICTED: mediator-associated protein 2 [Jatropha curcas]
12 Hb_119583_010 0.1077704786 - - 60S ribosomal protein L12A [Hevea brasiliensis]
13 Hb_024714_030 0.1142149183 - - PREDICTED: sm-like protein LSM4 [Jatropha curcas]
14 Hb_033642_020 0.1144097257 - - hypothetical protein JCGZ_19094 [Jatropha curcas]
15 Hb_001115_050 0.1144657213 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
16 Hb_003638_140 0.115732587 - - protein binding protein, putative [Ricinus communis]
17 Hb_000700_090 0.1166123933 - - protein with unknown function [Ricinus communis]
18 Hb_000172_400 0.1170244331 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
19 Hb_001369_060 0.1170394143 - - PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Jatropha curcas]
20 Hb_026048_090 0.1171616707 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_066807_010 Hb_066807_010 Hb_026048_100 Hb_026048_100 Hb_066807_010--Hb_026048_100 Hb_002681_140 Hb_002681_140 Hb_066807_010--Hb_002681_140 Hb_004852_030 Hb_004852_030 Hb_066807_010--Hb_004852_030 Hb_032531_030 Hb_032531_030 Hb_066807_010--Hb_032531_030 Hb_000365_360 Hb_000365_360 Hb_066807_010--Hb_000365_360 Hb_001902_050 Hb_001902_050 Hb_066807_010--Hb_001902_050 Hb_003638_030 Hb_003638_030 Hb_026048_100--Hb_003638_030 Hb_006602_020 Hb_006602_020 Hb_026048_100--Hb_006602_020 Hb_000700_090 Hb_000700_090 Hb_026048_100--Hb_000700_090 Hb_000057_060 Hb_000057_060 Hb_026048_100--Hb_000057_060 Hb_000172_400 Hb_000172_400 Hb_026048_100--Hb_000172_400 Hb_002391_110 Hb_002391_110 Hb_002681_140--Hb_002391_110 Hb_000176_140 Hb_000176_140 Hb_002681_140--Hb_000176_140 Hb_000284_200 Hb_000284_200 Hb_002681_140--Hb_000284_200 Hb_002044_090 Hb_002044_090 Hb_002681_140--Hb_002044_090 Hb_127979_010 Hb_127979_010 Hb_002681_140--Hb_127979_010 Hb_011496_010 Hb_011496_010 Hb_002681_140--Hb_011496_010 Hb_000803_150 Hb_000803_150 Hb_004852_030--Hb_000803_150 Hb_002007_270 Hb_002007_270 Hb_004852_030--Hb_002007_270 Hb_185467_020 Hb_185467_020 Hb_004852_030--Hb_185467_020 Hb_000165_030 Hb_000165_030 Hb_004852_030--Hb_000165_030 Hb_001981_070 Hb_001981_070 Hb_004852_030--Hb_001981_070 Hb_014834_120 Hb_014834_120 Hb_032531_030--Hb_014834_120 Hb_032531_030--Hb_001902_050 Hb_002038_060 Hb_002038_060 Hb_032531_030--Hb_002038_060 Hb_032531_030--Hb_000057_060 Hb_032531_030--Hb_026048_100 Hb_098709_010 Hb_098709_010 Hb_000365_360--Hb_098709_010 Hb_000317_430 Hb_000317_430 Hb_000365_360--Hb_000317_430 Hb_001369_060 Hb_001369_060 Hb_000365_360--Hb_001369_060 Hb_002014_080 Hb_002014_080 Hb_000365_360--Hb_002014_080 Hb_000035_380 Hb_000035_380 Hb_000365_360--Hb_000035_380 Hb_118419_020 Hb_118419_020 Hb_000365_360--Hb_118419_020 Hb_001902_050--Hb_000700_090 Hb_005539_290 Hb_005539_290 Hb_001902_050--Hb_005539_290 Hb_001902_050--Hb_006602_020 Hb_001902_050--Hb_000365_360 Hb_004735_010 Hb_004735_010 Hb_001902_050--Hb_004735_010 Hb_001902_050--Hb_026048_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.969913 0.228941 0.0995231 0.12349 1.37184 1.92285
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.697603 0.960052 0.834978 0.184377 0.0927386

CAGE analysis