Hb_067345_020

Information

Type -
Description -
Location Contig67345: 13149-14098
Sequence    

Annotation

kegg
ID gmx:102670328
description uncharacterized LOC102670328
nr
ID XP_012070206.1
description PREDICTED: uncharacterized protein LOC105632434 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID W9QD67
description Uncharacterized protein OS=Morus notabilis GN=L484_012687 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53503: 14995-15420
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_067345_020 0.0 - - PREDICTED: uncharacterized protein LOC105632434 [Jatropha curcas]
2 Hb_000417_150 0.1336385331 - - hypothetical protein JCGZ_21586 [Jatropha curcas]
3 Hb_028872_100 0.1426743015 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
4 Hb_026053_030 0.158850265 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
5 Hb_048476_070 0.1589350128 - - conserved hypothetical protein [Ricinus communis]
6 Hb_005470_040 0.1644306993 - - hypothetical protein POPTR_0015s09760g [Populus trichocarpa]
7 Hb_000685_140 0.1647546292 - - PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
8 Hb_001411_100 0.1676290461 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
9 Hb_004994_200 0.1733497923 - - PREDICTED: uncharacterized protein LOC105174340 [Sesamum indicum]
10 Hb_004007_230 0.1745616268 - - PREDICTED: putative formamidase C869.04 isoform X1 [Jatropha curcas]
11 Hb_001452_090 0.1763784309 - - PREDICTED: serine carboxypeptidase II-3-like [Vitis vinifera]
12 Hb_000767_010 0.180034304 - - PREDICTED: geraniol 8-hydroxylase-like isoform X2 [Solanum lycopersicum]
13 Hb_000101_320 0.1807683509 - - -
14 Hb_005306_020 0.1812151594 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
15 Hb_031949_010 0.1838014389 - - -
16 Hb_001357_360 0.1853955494 - - zinc finger protein, putative [Ricinus communis]
17 Hb_000044_050 0.1856486123 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
18 Hb_005305_030 0.1864250049 - - hypothetical protein JCGZ_25922 [Jatropha curcas]
19 Hb_000009_390 0.1900985931 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]
20 Hb_002818_070 0.1912943594 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_067345_020 Hb_067345_020 Hb_000417_150 Hb_000417_150 Hb_067345_020--Hb_000417_150 Hb_028872_100 Hb_028872_100 Hb_067345_020--Hb_028872_100 Hb_026053_030 Hb_026053_030 Hb_067345_020--Hb_026053_030 Hb_048476_070 Hb_048476_070 Hb_067345_020--Hb_048476_070 Hb_005470_040 Hb_005470_040 Hb_067345_020--Hb_005470_040 Hb_000685_140 Hb_000685_140 Hb_067345_020--Hb_000685_140 Hb_000417_150--Hb_026053_030 Hb_000417_150--Hb_028872_100 Hb_004007_230 Hb_004007_230 Hb_000417_150--Hb_004007_230 Hb_031949_010 Hb_031949_010 Hb_000417_150--Hb_031949_010 Hb_000044_050 Hb_000044_050 Hb_000417_150--Hb_000044_050 Hb_001411_100 Hb_001411_100 Hb_000417_150--Hb_001411_100 Hb_028872_100--Hb_000685_140 Hb_028872_100--Hb_001411_100 Hb_000767_010 Hb_000767_010 Hb_028872_100--Hb_000767_010 Hb_000101_320 Hb_000101_320 Hb_028872_100--Hb_000101_320 Hb_005306_020 Hb_005306_020 Hb_028872_100--Hb_005306_020 Hb_026053_030--Hb_000044_050 Hb_026053_030--Hb_004007_230 Hb_026053_030--Hb_031949_010 Hb_011344_140 Hb_011344_140 Hb_026053_030--Hb_011344_140 Hb_001907_020 Hb_001907_020 Hb_026053_030--Hb_001907_020 Hb_048476_070--Hb_005470_040 Hb_048476_070--Hb_031949_010 Hb_002815_040 Hb_002815_040 Hb_048476_070--Hb_002815_040 Hb_048476_070--Hb_000417_150 Hb_048476_070--Hb_026053_030 Hb_005470_040--Hb_031949_010 Hb_000264_340 Hb_000264_340 Hb_005470_040--Hb_000264_340 Hb_001357_360 Hb_001357_360 Hb_005470_040--Hb_001357_360 Hb_000377_160 Hb_000377_160 Hb_005470_040--Hb_000377_160 Hb_109489_010 Hb_109489_010 Hb_005470_040--Hb_109489_010 Hb_123560_050 Hb_123560_050 Hb_005470_040--Hb_123560_050 Hb_000685_140--Hb_000101_320 Hb_000685_140--Hb_001411_100 Hb_001452_090 Hb_001452_090 Hb_000685_140--Hb_001452_090 Hb_000600_080 Hb_000600_080 Hb_000685_140--Hb_000600_080 Hb_008834_010 Hb_008834_010 Hb_000685_140--Hb_008834_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.40454 0.165632 0.430477 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.134303 0.626675 1.78382

CAGE analysis