Hb_067558_010

Information

Type -
Description -
Location Contig67558: 175-1110
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID KDP37049.1
description hypothetical protein JCGZ_06105 [Jatropha curcas]
swissprot
ID Q9FRS6
description Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana GN=PXL1 PE=2 SV=1
trembl
ID A0A067KYW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06105 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable lrr receptor-like serine threonine-protein kinase at4g36180

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_067558_010 0.0 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
2 Hb_000041_210 0.0648077804 - - PREDICTED: cysteine-rich receptor-like protein kinase 42 [Jatropha curcas]
3 Hb_005181_190 0.0734522574 - - PREDICTED: uncharacterized protein LOC105643550 [Jatropha curcas]
4 Hb_004116_050 0.0787815505 - - PREDICTED: cytochrome P450 90A1 [Jatropha curcas]
5 Hb_000239_050 0.0837546344 - - PREDICTED: cyclin-D5-1-like [Jatropha curcas]
6 Hb_000947_010 0.0950357296 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
7 Hb_001409_080 0.0991952339 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Populus euphratica]
8 Hb_000675_010 0.0995285111 - - PREDICTED: cytokinin dehydrogenase 7 [Jatropha curcas]
9 Hb_131876_010 0.1006205406 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like isoform X1 [Jatropha curcas]
10 Hb_006053_020 0.1009965846 - - CAP [Theobroma cacao]
11 Hb_127263_010 0.1012235717 - - hypothetical protein JCGZ_02828 [Jatropha curcas]
12 Hb_012389_010 0.1036731642 - - hypothetical protein POPTR_0018s11820g [Populus trichocarpa]
13 Hb_000483_430 0.1087884288 - - -
14 Hb_004946_010 0.1088194408 - - hypothetical protein POPTR_0013s035502g, partial [Populus trichocarpa]
15 Hb_006970_120 0.1101724876 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004855_080 0.1106016406 - - hypothetical protein JCGZ_25039 [Jatropha curcas]
17 Hb_176680_010 0.1148284527 - - hypothetical protein JCGZ_22787 [Jatropha curcas]
18 Hb_001405_040 0.1184289909 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Jatropha curcas]
19 Hb_002822_010 0.1203134626 - - PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Populus euphratica]
20 Hb_000866_060 0.1203939684 - - putative glycerol-3-phosphate acyltransferase [Vernicia fordii]

Gene co-expression network

sample Hb_067558_010 Hb_067558_010 Hb_000041_210 Hb_000041_210 Hb_067558_010--Hb_000041_210 Hb_005181_190 Hb_005181_190 Hb_067558_010--Hb_005181_190 Hb_004116_050 Hb_004116_050 Hb_067558_010--Hb_004116_050 Hb_000239_050 Hb_000239_050 Hb_067558_010--Hb_000239_050 Hb_000947_010 Hb_000947_010 Hb_067558_010--Hb_000947_010 Hb_001409_080 Hb_001409_080 Hb_067558_010--Hb_001409_080 Hb_012389_010 Hb_012389_010 Hb_000041_210--Hb_012389_010 Hb_000675_010 Hb_000675_010 Hb_000041_210--Hb_000675_010 Hb_131876_010 Hb_131876_010 Hb_000041_210--Hb_131876_010 Hb_000041_210--Hb_000239_050 Hb_000483_430 Hb_000483_430 Hb_000041_210--Hb_000483_430 Hb_005181_190--Hb_000041_210 Hb_005181_190--Hb_000947_010 Hb_005181_190--Hb_004116_050 Hb_005181_190--Hb_000239_050 Hb_023732_080 Hb_023732_080 Hb_005181_190--Hb_023732_080 Hb_001405_040 Hb_001405_040 Hb_004116_050--Hb_001405_040 Hb_000416_090 Hb_000416_090 Hb_004116_050--Hb_000416_090 Hb_001244_070 Hb_001244_070 Hb_004116_050--Hb_001244_070 Hb_004855_080 Hb_004855_080 Hb_004116_050--Hb_004855_080 Hb_127263_010 Hb_127263_010 Hb_000239_050--Hb_127263_010 Hb_000866_060 Hb_000866_060 Hb_000239_050--Hb_000866_060 Hb_000300_110 Hb_000300_110 Hb_000239_050--Hb_000300_110 Hb_007545_070 Hb_007545_070 Hb_000239_050--Hb_007545_070 Hb_000424_130 Hb_000424_130 Hb_000239_050--Hb_000424_130 Hb_003043_130 Hb_003043_130 Hb_000947_010--Hb_003043_130 Hb_005575_010 Hb_005575_010 Hb_000947_010--Hb_005575_010 Hb_174168_010 Hb_174168_010 Hb_000947_010--Hb_174168_010 Hb_000947_010--Hb_000866_060 Hb_001409_080--Hb_127263_010 Hb_001409_080--Hb_000866_060 Hb_176680_010 Hb_176680_010 Hb_001409_080--Hb_176680_010 Hb_001409_080--Hb_000239_050 Hb_006938_060 Hb_006938_060 Hb_001409_080--Hb_006938_060 Hb_002762_050 Hb_002762_050 Hb_001409_080--Hb_002762_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0601367 0.775223 0.421139 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.261671 0.969683

CAGE analysis