Hb_068447_010

Information

Type -
Description -
Location Contig68447: 1734-2733
Sequence    

Annotation

kegg
ID rcu:RCOM_1593400
description protein with unknown function (EC:3.1.3.56)
nr
ID XP_002510331.1
description protein with unknown function [Ricinus communis]
swissprot
ID Q5EAF2
description Type I inositol 1,4,5-trisphosphate 5-phosphatase 11 OS=Arabidopsis thaliana GN=At1g47510 PE=2 SV=1
trembl
ID B9R7N8
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1593400 PE=4 SV=1
Gene Ontology
ID GO:0004439
description type i inositol -trisphosphate 5-phosphatase 11-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54051: 2293-2586
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_068447_010 0.0 - - protein with unknown function [Ricinus communis]
2 Hb_007676_070 0.0037023883 - - PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1-like [Populus euphratica]
3 Hb_000764_060 0.0051692941 - - PREDICTED: uncharacterized protein LOC101491058 [Cicer arietinum]
4 Hb_000756_040 0.0092471879 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
5 Hb_008078_040 0.0106146779 - - PREDICTED: uncharacterized protein LOC105764710 isoform X3 [Gossypium raimondii]
6 Hb_011924_010 0.0127063659 - - hypothetical protein, partial [Phaeodactylibacter xiamenensis]
7 Hb_005204_030 0.0148066414 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
8 Hb_101778_020 0.0195983889 transcription factor TF Family: SRS conserved hypothetical protein [Ricinus communis]
9 Hb_006586_020 0.0238883442 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
10 Hb_001104_260 0.024873112 - - hypothetical protein JCGZ_23628 [Jatropha curcas]
11 Hb_001403_100 0.0253216867 - - hypothetical protein CICLE_v10017457mg, partial [Citrus clementina]
12 Hb_000123_320 0.0312298973 - - PREDICTED: MADS-box protein FLOWERING LOCUS C-like [Jatropha curcas]
13 Hb_003430_010 0.0327306206 - - xyloglucan endotransglucosylase/hydrolase protein 33 precursor [Populus trichocarpa]
14 Hb_004829_050 0.0330928399 - - hypothetical protein TRIUR3_09654 [Triticum urartu]
15 Hb_011639_130 0.0344865943 - - mads box protein, putative [Ricinus communis]
16 Hb_003392_020 0.0392939794 - - PREDICTED: uncharacterized protein LOC105650609 [Jatropha curcas]
17 Hb_006011_060 0.039976798 - - -
18 Hb_001271_040 0.045553496 - - hypothetical protein POPTR_0019s039903g, partial [Populus trichocarpa]
19 Hb_008248_010 0.0478067462 - - -
20 Hb_185340_020 0.0556115481 - - -

Gene co-expression network

sample Hb_068447_010 Hb_068447_010 Hb_007676_070 Hb_007676_070 Hb_068447_010--Hb_007676_070 Hb_000764_060 Hb_000764_060 Hb_068447_010--Hb_000764_060 Hb_000756_040 Hb_000756_040 Hb_068447_010--Hb_000756_040 Hb_008078_040 Hb_008078_040 Hb_068447_010--Hb_008078_040 Hb_011924_010 Hb_011924_010 Hb_068447_010--Hb_011924_010 Hb_005204_030 Hb_005204_030 Hb_068447_010--Hb_005204_030 Hb_007676_070--Hb_000764_060 Hb_007676_070--Hb_000756_040 Hb_007676_070--Hb_008078_040 Hb_007676_070--Hb_005204_030 Hb_007676_070--Hb_011924_010 Hb_000764_060--Hb_000756_040 Hb_000764_060--Hb_008078_040 Hb_000764_060--Hb_005204_030 Hb_000764_060--Hb_011924_010 Hb_000756_040--Hb_008078_040 Hb_000756_040--Hb_005204_030 Hb_001104_260 Hb_001104_260 Hb_000756_040--Hb_001104_260 Hb_008078_040--Hb_005204_030 Hb_008078_040--Hb_001104_260 Hb_101778_020 Hb_101778_020 Hb_011924_010--Hb_101778_020 Hb_006586_020 Hb_006586_020 Hb_011924_010--Hb_006586_020 Hb_000123_320 Hb_000123_320 Hb_011924_010--Hb_000123_320 Hb_005204_030--Hb_001104_260 Hb_001403_100 Hb_001403_100 Hb_005204_030--Hb_001403_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.245492 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0419419 0

CAGE analysis