Hb_068576_010

Information

Type -
Description -
Location Contig68576: 317-1347
Sequence    

Annotation

kegg
ID mdm:103410611
description probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840
nr
ID KDP21156.1
description hypothetical protein JCGZ_21627 [Jatropha curcas]
swissprot
ID Q9ASQ6
description Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana GN=RFK1 PE=2 SV=3
trembl
ID A0A067JBH6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21627 PE=3 SV=1
Gene Ontology
ID GO:0000166
description probable lrr receptor-like serine threonine-protein kinase at1g07650 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_068576_010 0.0 - - hypothetical protein JCGZ_21627 [Jatropha curcas]
2 Hb_000094_120 0.1533893212 - - PREDICTED: uncharacterized protein At1g01500 [Jatropha curcas]
3 Hb_004656_010 0.1603502056 - - PREDICTED: probable calcium-binding protein CML49 [Jatropha curcas]
4 Hb_002597_020 0.16099826 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
5 Hb_064985_010 0.161195892 - - Leucine-rich repeat transmembrane protein kinase, putative [Theobroma cacao]
6 Hb_168068_010 0.168725388 - - Disease resistance protein RFL1, putative [Ricinus communis]
7 Hb_000847_020 0.1722026442 - - PREDICTED: ras-related protein RABA5b [Jatropha curcas]
8 Hb_043987_010 0.1727904181 - - glutathione s-transferase, putative [Ricinus communis]
9 Hb_000254_010 0.1744242207 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
10 Hb_005087_030 0.1744436409 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
11 Hb_025432_010 0.1788571108 - - hypothetical protein JCGZ_21627 [Jatropha curcas]
12 Hb_000094_250 0.1789096795 - - PREDICTED: uncharacterized protein LOC105633774 isoform X3 [Jatropha curcas]
13 Hb_006241_010 0.1805064857 desease resistance Gene Name: NB-ARC Disease resistance protein RFL1, putative [Ricinus communis]
14 Hb_000062_490 0.1828822419 - - PREDICTED: lipoxygenase 6, chloroplastic [Jatropha curcas]
15 Hb_002477_100 0.1829590314 - - PREDICTED: protein Brevis radix-like 2 [Jatropha curcas]
16 Hb_005649_010 0.1843538774 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
17 Hb_001636_010 0.1911771571 - - hypothetical protein JCGZ_01264 [Jatropha curcas]
18 Hb_003142_060 0.1912990126 - - PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Jatropha curcas]
19 Hb_004920_110 0.1924005844 - - conserved hypothetical protein [Ricinus communis]
20 Hb_021576_120 0.192535753 - - DNA-directed RNA polymerase subunit, putative [Ricinus communis]

Gene co-expression network

sample Hb_068576_010 Hb_068576_010 Hb_000094_120 Hb_000094_120 Hb_068576_010--Hb_000094_120 Hb_004656_010 Hb_004656_010 Hb_068576_010--Hb_004656_010 Hb_002597_020 Hb_002597_020 Hb_068576_010--Hb_002597_020 Hb_064985_010 Hb_064985_010 Hb_068576_010--Hb_064985_010 Hb_168068_010 Hb_168068_010 Hb_068576_010--Hb_168068_010 Hb_000847_020 Hb_000847_020 Hb_068576_010--Hb_000847_020 Hb_000094_250 Hb_000094_250 Hb_000094_120--Hb_000094_250 Hb_000062_490 Hb_000062_490 Hb_000094_120--Hb_000062_490 Hb_002030_180 Hb_002030_180 Hb_000094_120--Hb_002030_180 Hb_006615_160 Hb_006615_160 Hb_000094_120--Hb_006615_160 Hb_005539_260 Hb_005539_260 Hb_000094_120--Hb_005539_260 Hb_000120_310 Hb_000120_310 Hb_004656_010--Hb_000120_310 Hb_003106_230 Hb_003106_230 Hb_004656_010--Hb_003106_230 Hb_001008_110 Hb_001008_110 Hb_004656_010--Hb_001008_110 Hb_000417_280 Hb_000417_280 Hb_004656_010--Hb_000417_280 Hb_003142_060 Hb_003142_060 Hb_004656_010--Hb_003142_060 Hb_004656_010--Hb_064985_010 Hb_002477_100 Hb_002477_100 Hb_002597_020--Hb_002477_100 Hb_023278_030 Hb_023278_030 Hb_002597_020--Hb_023278_030 Hb_021576_120 Hb_021576_120 Hb_002597_020--Hb_021576_120 Hb_000005_340 Hb_000005_340 Hb_002597_020--Hb_000005_340 Hb_002597_020--Hb_000847_020 Hb_064985_010--Hb_001008_110 Hb_007894_030 Hb_007894_030 Hb_064985_010--Hb_007894_030 Hb_006634_090 Hb_006634_090 Hb_064985_010--Hb_006634_090 Hb_001636_010 Hb_001636_010 Hb_064985_010--Hb_001636_010 Hb_000527_140 Hb_000527_140 Hb_064985_010--Hb_000527_140 Hb_005649_010 Hb_005649_010 Hb_064985_010--Hb_005649_010 Hb_005087_030 Hb_005087_030 Hb_168068_010--Hb_005087_030 Hb_000771_030 Hb_000771_030 Hb_168068_010--Hb_000771_030 Hb_068332_010 Hb_068332_010 Hb_168068_010--Hb_068332_010 Hb_131662_010 Hb_131662_010 Hb_168068_010--Hb_131662_010 Hb_004544_090 Hb_004544_090 Hb_168068_010--Hb_004544_090 Hb_000417_120 Hb_000417_120 Hb_168068_010--Hb_000417_120 Hb_000847_020--Hb_000527_140 Hb_000024_130 Hb_000024_130 Hb_000847_020--Hb_000024_130 Hb_000847_020--Hb_064985_010 Hb_000847_020--Hb_003142_060 Hb_000527_070 Hb_000527_070 Hb_000847_020--Hb_000527_070 Hb_000847_020--Hb_004656_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 10.7316 8.62027 8.92415 0.231578 0.227632
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.229419 2.74411 12.4292 2.62045

CAGE analysis