Hb_069237_010

Information

Type -
Description -
Location Contig69237: 63-4165
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_069237_010 0.0 - - -
2 Hb_003729_040 0.0058671111 - - o-methyltransferase, putative [Ricinus communis]
3 Hb_130357_010 0.0100897587 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
4 Hb_000258_010 0.0123246282 - - lipid transfer precursor protein [Hevea brasiliensis]
5 Hb_005976_030 0.017375725 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
6 Hb_001347_020 0.0206833176 - - PREDICTED: cytochrome P450 86B1-like [Populus euphratica]
7 Hb_000422_100 0.0219538281 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
8 Hb_111442_010 0.0247898092 desease resistance Gene Name: AAA_16 LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao]
9 Hb_001892_040 0.0302195387 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
10 Hb_000628_090 0.030274348 - - hypothetical protein B456_010G019400 [Gossypium raimondii]
11 Hb_054865_110 0.031534505 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000194_040 0.0320010342 - - carbonic anhydrase, putative [Ricinus communis]
13 Hb_001591_020 0.035353778 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
14 Hb_000733_170 0.0411982034 transcription factor TF Family: HB bel1 homeotic protein, putative [Ricinus communis]
15 Hb_000530_080 0.0445227402 - - PREDICTED: serine/threonine-protein kinase D6PKL2-like [Jatropha curcas]
16 Hb_004032_170 0.0463317853 - - PREDICTED: indole-3-acetic acid-induced protein ARG7 [Jatropha curcas]
17 Hb_002601_030 0.0469622225 - - PREDICTED: uncharacterized protein LOC105634908 [Jatropha curcas]
18 Hb_007432_040 0.0470791084 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 3-like [Jatropha curcas]
19 Hb_000325_090 0.0476930306 transcription factor TF Family: bHLH PREDICTED: transcription factor PRE5-like [Gossypium raimondii]
20 Hb_118730_050 0.0523130397 - - RING/U-box superfamily protein isoform 4 [Theobroma cacao]

Gene co-expression network

sample Hb_069237_010 Hb_069237_010 Hb_003729_040 Hb_003729_040 Hb_069237_010--Hb_003729_040 Hb_130357_010 Hb_130357_010 Hb_069237_010--Hb_130357_010 Hb_000258_010 Hb_000258_010 Hb_069237_010--Hb_000258_010 Hb_005976_030 Hb_005976_030 Hb_069237_010--Hb_005976_030 Hb_001347_020 Hb_001347_020 Hb_069237_010--Hb_001347_020 Hb_000422_100 Hb_000422_100 Hb_069237_010--Hb_000422_100 Hb_003729_040--Hb_130357_010 Hb_003729_040--Hb_001347_020 Hb_003729_040--Hb_000422_100 Hb_003729_040--Hb_000258_010 Hb_111442_010 Hb_111442_010 Hb_003729_040--Hb_111442_010 Hb_130357_010--Hb_001347_020 Hb_130357_010--Hb_000422_100 Hb_130357_010--Hb_111442_010 Hb_000628_090 Hb_000628_090 Hb_130357_010--Hb_000628_090 Hb_000258_010--Hb_005976_030 Hb_001892_040 Hb_001892_040 Hb_000258_010--Hb_001892_040 Hb_000258_010--Hb_130357_010 Hb_001591_020 Hb_001591_020 Hb_000258_010--Hb_001591_020 Hb_005976_030--Hb_001892_040 Hb_005976_030--Hb_001591_020 Hb_005976_030--Hb_003729_040 Hb_000733_170 Hb_000733_170 Hb_005976_030--Hb_000733_170 Hb_001347_020--Hb_000422_100 Hb_001347_020--Hb_111442_010 Hb_001347_020--Hb_000628_090 Hb_054865_110 Hb_054865_110 Hb_001347_020--Hb_054865_110 Hb_000194_040 Hb_000194_040 Hb_001347_020--Hb_000194_040 Hb_000422_100--Hb_111442_010 Hb_000422_100--Hb_000628_090 Hb_000422_100--Hb_054865_110 Hb_000422_100--Hb_000194_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0333582 0.82198 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis