Hb_069591_010

Information

Type -
Description -
Location Contig69591: 277-2490
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_069591_010 0.0 - - -
2 Hb_001140_090 0.1080504421 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000137_020 0.1246733177 - - PREDICTED: ras-related protein RABA5b [Jatropha curcas]
4 Hb_008725_050 0.1273608232 - - syntaxin, putative [Ricinus communis]
5 Hb_000156_090 0.1323393376 - - PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3 isoform X1 [Jatropha curcas]
6 Hb_011618_070 0.1384511848 - - NMDA receptor-regulated protein [Medicago truncatula]
7 Hb_003018_030 0.1402159704 - - PREDICTED: GDP-mannose 4,6 dehydratase 1 [Jatropha curcas]
8 Hb_012286_090 0.1408992768 - - PREDICTED: lipid phosphate phosphatase delta [Jatropha curcas]
9 Hb_004943_030 0.1409933347 - - PREDICTED: cation-chloride cotransporter 1 [Jatropha curcas]
10 Hb_000890_160 0.1412885974 - - PREDICTED: anaphase-promoting complex subunit 7 [Jatropha curcas]
11 Hb_000956_040 0.1419988949 - - PREDICTED: probable E3 ubiquitin-protein ligase HIP1 [Jatropha curcas]
12 Hb_003687_120 0.1458270463 - - PREDICTED: serine/threonine-protein kinase tricorner-like [Jatropha curcas]
13 Hb_010068_070 0.1460738515 - - calcium-dependent protein kinase, putative [Ricinus communis]
14 Hb_000512_010 0.1470900694 - - PREDICTED: uncharacterized protein LOC105650728 [Jatropha curcas]
15 Hb_000809_020 0.1472630445 desease resistance Gene Name: RPW8 leucine-rich repeat-containing protein, putative [Ricinus communis]
16 Hb_156635_020 0.1473938497 - - PREDICTED: L-lactate dehydrogenase B [Jatropha curcas]
17 Hb_026198_060 0.1480572219 - - PREDICTED: calcium-dependent protein kinase 11 [Jatropha curcas]
18 Hb_006573_040 0.1503349929 - - DNA binding protein, putative [Ricinus communis]
19 Hb_000086_430 0.1504302905 - - hypothetical protein JCGZ_17649 [Jatropha curcas]
20 Hb_000243_260 0.1506502733 - - PREDICTED: UPF0183 protein At3g51130 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_069591_010 Hb_069591_010 Hb_001140_090 Hb_001140_090 Hb_069591_010--Hb_001140_090 Hb_000137_020 Hb_000137_020 Hb_069591_010--Hb_000137_020 Hb_008725_050 Hb_008725_050 Hb_069591_010--Hb_008725_050 Hb_000156_090 Hb_000156_090 Hb_069591_010--Hb_000156_090 Hb_011618_070 Hb_011618_070 Hb_069591_010--Hb_011618_070 Hb_003018_030 Hb_003018_030 Hb_069591_010--Hb_003018_030 Hb_007839_020 Hb_007839_020 Hb_001140_090--Hb_007839_020 Hb_001140_090--Hb_000156_090 Hb_001328_080 Hb_001328_080 Hb_001140_090--Hb_001328_080 Hb_026198_010 Hb_026198_010 Hb_001140_090--Hb_026198_010 Hb_002965_050 Hb_002965_050 Hb_001140_090--Hb_002965_050 Hb_026198_060 Hb_026198_060 Hb_001140_090--Hb_026198_060 Hb_011161_020 Hb_011161_020 Hb_000137_020--Hb_011161_020 Hb_005551_020 Hb_005551_020 Hb_000137_020--Hb_005551_020 Hb_000574_420 Hb_000574_420 Hb_000137_020--Hb_000574_420 Hb_001427_150 Hb_001427_150 Hb_000137_020--Hb_001427_150 Hb_009367_080 Hb_009367_080 Hb_000137_020--Hb_009367_080 Hb_014231_010 Hb_014231_010 Hb_000137_020--Hb_014231_010 Hb_003687_120 Hb_003687_120 Hb_008725_050--Hb_003687_120 Hb_006452_180 Hb_006452_180 Hb_008725_050--Hb_006452_180 Hb_000956_040 Hb_000956_040 Hb_008725_050--Hb_000956_040 Hb_000890_160 Hb_000890_160 Hb_008725_050--Hb_000890_160 Hb_008725_050--Hb_000156_090 Hb_003428_090 Hb_003428_090 Hb_008725_050--Hb_003428_090 Hb_000156_090--Hb_002965_050 Hb_000156_090--Hb_003018_030 Hb_002900_120 Hb_002900_120 Hb_000156_090--Hb_002900_120 Hb_000156_090--Hb_003428_090 Hb_000638_280 Hb_000638_280 Hb_000156_090--Hb_000638_280 Hb_000243_260 Hb_000243_260 Hb_011618_070--Hb_000243_260 Hb_001488_020 Hb_001488_020 Hb_011618_070--Hb_001488_020 Hb_003758_010 Hb_003758_010 Hb_011618_070--Hb_003758_010 Hb_002631_210 Hb_002631_210 Hb_011618_070--Hb_002631_210 Hb_002042_050 Hb_002042_050 Hb_011618_070--Hb_002042_050 Hb_000206_160 Hb_000206_160 Hb_011618_070--Hb_000206_160 Hb_003018_030--Hb_002965_050 Hb_000866_140 Hb_000866_140 Hb_003018_030--Hb_000866_140 Hb_004319_050 Hb_004319_050 Hb_003018_030--Hb_004319_050 Hb_000034_110 Hb_000034_110 Hb_003018_030--Hb_000034_110 Hb_003018_030--Hb_003428_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.57054 3.13765 3.59488 2.13212 0.525459 0.810836
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.637537 0.667734 2.11479 2.08857 1.16011

CAGE analysis