Hb_070613_010

Information

Type -
Description -
Location Contig70613: 25-657
Sequence    

Annotation

kegg
ID mdm:103426907
description probable receptor-like protein kinase At1g67000
nr
ID XP_012066189.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID Q9FID5
description Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1
trembl
ID A0A067LFF5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23766 PE=4 SV=1
Gene Ontology
ID GO:0005524
description probable receptor-like protein kinase at1g67000 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_070613_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_002301_340 0.080749346 transcription factor TF Family: B3 leafy cotyledon 2 [Ricinus communis]
3 Hb_002548_020 0.0991136563 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
4 Hb_134022_010 0.1035663669 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
5 Hb_000402_180 0.1040731385 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
6 Hb_002783_130 0.106069545 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Jatropha curcas]
7 Hb_002110_050 0.1094523001 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003929_040 0.1177622419 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
9 Hb_001221_070 0.1192543794 - - PREDICTED: calcium-binding protein CML38-like [Jatropha curcas]
10 Hb_001277_370 0.1250302962 transcription factor TF Family: HSF Heat shock factor protein HSF30, putative [Ricinus communis]
11 Hb_004109_150 0.1282029589 - - glutathione-S-transferase tau 1 [Hevea brasiliensis]
12 Hb_026016_010 0.1286334169 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
13 Hb_036492_020 0.1292946974 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
14 Hb_000319_010 0.1342039585 - - hypothetical protein POPTR_0016s03600g [Populus trichocarpa]
15 Hb_006002_020 0.1343000763 - - PREDICTED: cytokinin dehydrogenase 7 [Jatropha curcas]
16 Hb_186995_010 0.1347817714 - - hypothetical protein POPTR_0012s01755g [Populus trichocarpa]
17 Hb_008810_030 0.1350533911 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
18 Hb_001660_130 0.1355829429 - - PREDICTED: serine/threonine-protein kinase-like protein CCR4 [Jatropha curcas]
19 Hb_004553_040 0.1357593826 - - PREDICTED: protein YLS9-like [Jatropha curcas]
20 Hb_167206_010 0.1379957626 - - hypothetical protein JCGZ_04542 [Jatropha curcas]

Gene co-expression network

sample Hb_070613_010 Hb_070613_010 Hb_002301_340 Hb_002301_340 Hb_070613_010--Hb_002301_340 Hb_002548_020 Hb_002548_020 Hb_070613_010--Hb_002548_020 Hb_134022_010 Hb_134022_010 Hb_070613_010--Hb_134022_010 Hb_000402_180 Hb_000402_180 Hb_070613_010--Hb_000402_180 Hb_002783_130 Hb_002783_130 Hb_070613_010--Hb_002783_130 Hb_002110_050 Hb_002110_050 Hb_070613_010--Hb_002110_050 Hb_026016_010 Hb_026016_010 Hb_002301_340--Hb_026016_010 Hb_002301_340--Hb_000402_180 Hb_012496_020 Hb_012496_020 Hb_002301_340--Hb_012496_020 Hb_167206_010 Hb_167206_010 Hb_002301_340--Hb_167206_010 Hb_004553_040 Hb_004553_040 Hb_002301_340--Hb_004553_040 Hb_002548_020--Hb_002110_050 Hb_004241_100 Hb_004241_100 Hb_002548_020--Hb_004241_100 Hb_002218_080 Hb_002218_080 Hb_002548_020--Hb_002218_080 Hb_000127_200 Hb_000127_200 Hb_002548_020--Hb_000127_200 Hb_160576_010 Hb_160576_010 Hb_002548_020--Hb_160576_010 Hb_004724_300 Hb_004724_300 Hb_134022_010--Hb_004724_300 Hb_008810_030 Hb_008810_030 Hb_134022_010--Hb_008810_030 Hb_134022_010--Hb_000402_180 Hb_036492_020 Hb_036492_020 Hb_134022_010--Hb_036492_020 Hb_001821_050 Hb_001821_050 Hb_134022_010--Hb_001821_050 Hb_004393_030 Hb_004393_030 Hb_134022_010--Hb_004393_030 Hb_000402_180--Hb_036492_020 Hb_003929_040 Hb_003929_040 Hb_000402_180--Hb_003929_040 Hb_001660_130 Hb_001660_130 Hb_000402_180--Hb_001660_130 Hb_000402_180--Hb_008810_030 Hb_002783_130--Hb_001660_130 Hb_000418_060 Hb_000418_060 Hb_002783_130--Hb_000418_060 Hb_004109_150 Hb_004109_150 Hb_002783_130--Hb_004109_150 Hb_006002_020 Hb_006002_020 Hb_002783_130--Hb_006002_020 Hb_002783_130--Hb_134022_010 Hb_002110_050--Hb_002218_080 Hb_002110_050--Hb_004241_100 Hb_002110_050--Hb_160576_010 Hb_000032_230 Hb_000032_230 Hb_002110_050--Hb_000032_230 Hb_002110_050--Hb_134022_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.806828 0.596577 0.392063 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.286286

CAGE analysis