Hb_070758_010

Information

Type -
Description -
Location Contig70758: 1284-1676
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_070758_010 0.0 - - -
2 Hb_004920_010 0.2376973291 - - PREDICTED: universal stress protein A-like protein [Jatropha curcas]
3 Hb_001009_100 0.2658519862 - - -
4 Hb_003206_020 0.272771031 - - PREDICTED: putative vacuolar protein sorting-associated protein 13A isoform X2 [Vitis vinifera]
5 Hb_001098_050 0.2827281854 - - PREDICTED: uncharacterized protein LOC100246941 [Vitis vinifera]
6 Hb_000236_090 0.2831063475 - - hypothetical protein EUGRSUZ_H00030 [Eucalyptus grandis]
7 Hb_143489_020 0.2849125475 - - -
8 Hb_007101_200 0.2863670495 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 22 isoform X1 [Jatropha curcas]
9 Hb_172970_010 0.2875970897 - - PREDICTED: uncharacterized protein LOC105637608 [Jatropha curcas]
10 Hb_000139_150 0.2900566384 - - transposon protein, putative, Mutator sub-class [Oryza sativa Japonica Group]
11 Hb_001631_100 0.2941122818 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
12 Hb_004884_020 0.2943588353 - - PREDICTED: BAG family molecular chaperone regulator 4 isoform X2 [Jatropha curcas]
13 Hb_001655_060 0.2971042281 - - PREDICTED: RNA-binding protein 28 [Jatropha curcas]
14 Hb_001117_160 0.3009293019 - - PREDICTED: pentatricopeptide repeat-containing protein At1g10270 [Jatropha curcas]
15 Hb_000735_170 0.3019261962 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
16 Hb_027337_090 0.3019462423 - - PREDICTED: sodium/hydrogen exchanger 7-like [Malus domestica]
17 Hb_002141_040 0.3029000295 - - -
18 Hb_009848_010 0.3035199799 - - putative acyl-activating enzyme 16, chloroplastic -like protein [Gossypium arboreum]
19 Hb_009898_020 0.3078222444 - - hypothetical protein JCGZ_23951 [Jatropha curcas]
20 Hb_015026_080 0.308649417 - - -

Gene co-expression network

sample Hb_070758_010 Hb_070758_010 Hb_004920_010 Hb_004920_010 Hb_070758_010--Hb_004920_010 Hb_001009_100 Hb_001009_100 Hb_070758_010--Hb_001009_100 Hb_003206_020 Hb_003206_020 Hb_070758_010--Hb_003206_020 Hb_001098_050 Hb_001098_050 Hb_070758_010--Hb_001098_050 Hb_000236_090 Hb_000236_090 Hb_070758_010--Hb_000236_090 Hb_143489_020 Hb_143489_020 Hb_070758_010--Hb_143489_020 Hb_001452_220 Hb_001452_220 Hb_004920_010--Hb_001452_220 Hb_005725_170 Hb_005725_170 Hb_004920_010--Hb_005725_170 Hb_001655_060 Hb_001655_060 Hb_004920_010--Hb_001655_060 Hb_002391_370 Hb_002391_370 Hb_004920_010--Hb_002391_370 Hb_002374_220 Hb_002374_220 Hb_004920_010--Hb_002374_220 Hb_000384_080 Hb_000384_080 Hb_004920_010--Hb_000384_080 Hb_003388_030 Hb_003388_030 Hb_001009_100--Hb_003388_030 Hb_004884_020 Hb_004884_020 Hb_001009_100--Hb_004884_020 Hb_004987_070 Hb_004987_070 Hb_001009_100--Hb_004987_070 Hb_000300_120 Hb_000300_120 Hb_001009_100--Hb_000300_120 Hb_000069_320 Hb_000069_320 Hb_001009_100--Hb_000069_320 Hb_067776_020 Hb_067776_020 Hb_001009_100--Hb_067776_020 Hb_020665_010 Hb_020665_010 Hb_003206_020--Hb_020665_010 Hb_007101_200 Hb_007101_200 Hb_003206_020--Hb_007101_200 Hb_145915_010 Hb_145915_010 Hb_003206_020--Hb_145915_010 Hb_009270_010 Hb_009270_010 Hb_003206_020--Hb_009270_010 Hb_000136_040 Hb_000136_040 Hb_003206_020--Hb_000136_040 Hb_002276_060 Hb_002276_060 Hb_003206_020--Hb_002276_060 Hb_002908_040 Hb_002908_040 Hb_001098_050--Hb_002908_040 Hb_004724_410 Hb_004724_410 Hb_001098_050--Hb_004724_410 Hb_000197_220 Hb_000197_220 Hb_001098_050--Hb_000197_220 Hb_001223_010 Hb_001223_010 Hb_001098_050--Hb_001223_010 Hb_000215_160 Hb_000215_160 Hb_001098_050--Hb_000215_160 Hb_000950_060 Hb_000950_060 Hb_001098_050--Hb_000950_060 Hb_010128_120 Hb_010128_120 Hb_000236_090--Hb_010128_120 Hb_000504_150 Hb_000504_150 Hb_000236_090--Hb_000504_150 Hb_007348_040 Hb_007348_040 Hb_000236_090--Hb_007348_040 Hb_000236_090--Hb_001009_100 Hb_002084_040 Hb_002084_040 Hb_000236_090--Hb_002084_040 Hb_000108_080 Hb_000108_080 Hb_000236_090--Hb_000108_080 Hb_143489_010 Hb_143489_010 Hb_143489_020--Hb_143489_010 Hb_012184_060 Hb_012184_060 Hb_143489_020--Hb_012184_060 Hb_012146_050 Hb_012146_050 Hb_143489_020--Hb_012146_050 Hb_000788_070 Hb_000788_070 Hb_143489_020--Hb_000788_070 Hb_001662_180 Hb_001662_180 Hb_143489_020--Hb_001662_180 Hb_188063_010 Hb_188063_010 Hb_143489_020--Hb_188063_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.270766 1.39188 0.406969 0 1.37478 3.14106
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.276701 1.08755 0 2.53112 2.51224

CAGE analysis